RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CLSPNQ9HAW4 1339 aa0.86□□□□□ -2.27
CCDC93-209ENST00000488908 PLEKHH1Q9ULM0 1364 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 A6NIZ1 184 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 HIP1O00291 1037 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 CLDN5O00501 218 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 MSH4O15457 936 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 KERAO60938 352 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 F10P00742 488 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 RBMY1CP0DJD4 496 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 FMO3P31513 532 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SHMT2P34897 504 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 RFC4P35249 363 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 LEPP41159 167 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 CXCL5P42830 114 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 GYG1P46976 350 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ARRB1P49407 418 aaPredicted RBP0.85□□□□□ -2.27
CCDC93-209ENST00000488908 EFNB2P52799 333 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 BIDP55957 195 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 RAP1BP61224 184 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF763Q0D2J5 394 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SMARCB1Q12824 385 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 GAMTQ14353 236 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 GNMTQ14749 295 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ATP6AP1Q15904 470 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM183BQ1AE95 376 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SLC5A12Q1EHB4 618 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 RFX4Q33E94 735 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 NSUN5P1Q3KNT7 163 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 COX19Q49B96 90 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 TIGD3Q6B0B8 471 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ATL3Q6DD88 541 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 CTRB2Q6GPI1 263 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 LRRC8BQ6P9F7 803 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF880Q6PDB4 577 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF571Q7Z3V5 609 aaPredicted RBP0.85□□□□□ -2.27
CCDC93-209ENST00000488908 CBWD2Q8IUF1 395 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 MFSD6LQ8IWD5 586 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM183AQ8IXX5 376 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 UBALD2Q8IYN6 164 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 RDH10Q8IZV5 341 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 LINC01561Q8N1V8 128 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 KDM8Q8N371 416 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 DHRSXQ8N5I4 330 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 BCORP1Q8N888 145 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 Q8N976 141 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 OR51G2Q8NGK0 314 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 OR52P1PQ8NH57 321 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 OR9G1Q8NH87 305 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ACER1Q8TDN7 264 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SLC13A3Q8WWT9 602 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ARPC1AQ92747 370 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 TIMD4Q96H15 378 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SEC22AQ96IW7 307 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 FCRL1Q96LA6 429 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 CCNL2Q96S94 520 aaPredicted RBP0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ATP6V0BQ99437 205 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ECSITQ9BQ95 431 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SLC35A5Q9BS91 424 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 GSDMCQ9BYG8 508 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 XPO4Q9C0E2 1151 aaKnown RBP0.85□□□□□ -2.27
CCDC93-209ENST00000488908 POLR1EQ9GZS1 481 aaKnown RBP0.85□□□□□ -2.27
CCDC93-209ENST00000488908 DHX33Q9H6R0 707 aaKnown RBP0.85□□□□□ -2.27
CCDC93-209ENST00000488908 VCPKMTQ9H867 229 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 SIAEQ9HAT2 523 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 FOLH1BQ9HBA9 442 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 GLRX2Q9NS18 164 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 MTRRQ9UBK8 725 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 TBK1Q9UHD2 729 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 GGA2Q9UJY4 613 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 TRAF3IP3Q9Y228 551 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 ALG6Q9Y672 507 aa0.85□□□□□ -2.27
CCDC93-209ENST00000488908 PIKFYVEQ9Y2I7 2098 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 A0A1W2PNV4 684 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 C7orf66A4D0T2 115 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 GSAPA4D1B5 854 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SLC31A2O15432 143 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 TPST2O60704 377 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SUPT3HO75486 399 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 VAMP5O95183 116 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 MT-ATP6P00846 226 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 IGF1P05019 195 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 LGALS2P05162 132 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 CA3P07451 260 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 H2BFMP0C1H6 154 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 PSMC3P17980 439 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 PGCP20142 388 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 TBXA2RP21731 343 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 FGF9P31371 208 aaPredicted RBP0.84□□□□□ -2.27
CCDC93-209ENST00000488908 VDAC2P45880 294 aaPredicted RBP0.84□□□□□ -2.27
CCDC93-209ENST00000488908 DAP3P51398 398 aaKnown RBP0.84□□□□□ -2.27
CCDC93-209ENST00000488908 HSD17B7P56937 341 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 CUL1Q13616 776 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 TAF9Q16594 264 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 MAPK6Q16659 721 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 C12orf60Q5U649 245 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 NIPAL3Q6P499 406 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 ZNF620Q6ZNG0 422 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SHISA6Q6ZSJ9 500 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 H2AFVQ71UI9 128 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 PRSS41Q7RTY9 318 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms