RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 CLCC1Q96S66 551 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 NPAS2Q99743 824 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 CAPS2Q9BXY5 557 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 PARD6BQ9BYG5 372 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 PLGRKTQ9HBL7 147 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 AIG1Q9NVV5 245 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 TMCO1Q9UM00 188 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 ASF1AQ9Y294 204 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 RPL36Q9Y3U8 105 aaKnown RBP3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 IGHV3OR16-13A0A075B7E8 117 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 IGHV1OR21-1A0A087WYE8 117 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 IQANK1A0A1B0GTG1 560 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 A8MXQ7 604 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 H0Y9J4 135 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 PRKAB2O43741 272 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 ZNF780AO75290 641 aaPredicted RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 SUPT7LO94864 414 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 DIRAS1O95057 198 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 KLK3P07288 261 aaPredicted RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 ATP6V1B2P21281 511 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 SHMT2P34897 504 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 RBMXP38159 391 aaKnown RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 RPS14P62263 151 aaKnown RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 SELENOTP62341 195 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 KLRB1Q12918 225 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 HERPUD1Q15011 391 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 KLHL38Q2WGJ6 581 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 PARP15Q460N3 678 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 TIGD3Q6B0B8 471 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 CENPPQ6IPU0 288 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 EFL1Q7Z2Z2 1120 aaKnown RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 ZNF571Q7Z3V5 609 aaPredicted RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 MFSD9Q8NBP5 474 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 BHLHE23Q8NDY6 225 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 TRPV1Q8NER1 839 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 OR4K14Q8NGD5 310 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 OR5D13Q8NGL4 314 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 CHCHD10Q8WYQ3 142 aaPredicted RBP3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 DCUN1D4Q92564 292 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 CXorf40BQ96DE9 158 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 SLC41A3Q96GZ6 507 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 SLC38A2Q96QD8 506 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 PSKH2Q96QS6 385 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 PLEKHF1Q96S99 279 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 RBKSQ9H477 322 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 NANOGQ9H9S0 305 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 POLE4Q9NR33 117 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 BFARQ9NZS9 450 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 KIF25Q9UIL4 384 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 TRAF3IP3Q9Y228 551 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 CDH10Q9Y6N8 788 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 PLEKHG1Q9ULL1 1385 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 PLEKHH1Q9ULM0 1364 aa3.19□□□□□ -1.9
SMNDC1-205ENST00000477763 TRIM64CA6NLI5 447 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 GOLGA8SH3BPF8 625 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 RIPK2O43353 540 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 SURF6O75683 361 aaKnown RBP3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 STAMBPO95630 424 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 IL1BP01584 269 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 CAPN1P07384 714 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 ELK1P19419 428 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 FUT3P21217 361 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 PCMT1P22061 227 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 CD1BP29016 333 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 IL12AP29459 219 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 CCR1P32246 355 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 RDXP35241 583 aaKnown RBP3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 DRD3P35462 400 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 KIR2DS4P43632 304 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 CAV2P51636 162 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 GPM6AP51674 278 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 KPNA2P52292 529 aaKnown RBP3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 UBE2HP62256 183 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 GNB2P62879 340 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 TGFBR3Q03167 851 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 OXA1LQ15070 435 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 NSDHLQ15738 373 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 MICBQ29980 383 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 DMRTC1Q5HYR2 192 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 OR52E8Q6IFG1 317 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 KDELC1Q6UW63 502 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 TMIGD1Q6UXZ0 262 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 ZNF679Q8IYX0 411 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 Q8N7P7 452 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 EIF1ADQ8N9N8 165 aaKnown RBP3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 OR51S1Q8NGJ8 323 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 SCFD1Q8WVM8 642 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 FGF11Q92914 225 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 UCN3Q969E3 161 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 RNF2Q99496 336 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 COPS8Q99627 209 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 SLC25A22Q9H936 323 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 COX16Q9P0S2 106 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 STAP1Q9ULZ2 295 aa3.18□□□□□ -1.9
SMNDC1-205ENST00000477763 ATP10AO60312 1499 aa3.17□□□□□ -1.9
SMNDC1-205ENST00000477763 KANK1Q14678 1352 aa3.17□□□□□ -1.9
SMNDC1-205ENST00000477763 IGKV1D-8A0A087WSZ0 117 aa3.17□□□□□ -1.9
SMNDC1-205ENST00000477763 TCRBV9S1A1TA0A576 114 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms