RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CLOCKO15516 846 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHST10O43529 356 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC25A17O43808 307 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 FGF17O60258 216 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 B4GALT2O60909 372 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SERPINB7O75635 380 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDC123O75794 336 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SOX30O94993 753 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CPNE6O95741 557 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 AGR2O95994 175 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 IFNW1P05000 195 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 IFNA16P05015 189 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ALPPP05187 535 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 HMGN2P05204 90 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ALOX5P09917 674 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SMIM10L1P0DMW3 83 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR12D1P0DN82 309 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 UQCRBP14927 111 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PORP16435 677 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ITGA2P17301 1181 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 GRK6P43250 576 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 GPR12P47775 334 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 GZMMP51124 257 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 XKP51811 444 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 MVDP53602 400 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARSFP54793 590 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TUBA1BP68363 451 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CCL7P80098 99 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAT1AQ00266 395 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 IL1RL1Q01638 556 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SPIBQ01892 262 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ACY1Q03154 408 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 STX4Q12846 297 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 EPS8Q12929 822 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 MED21Q13503 144 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 RUNX2Q13950 521 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM53BQ14153 422 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SF3B4Q15427 424 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNHIT3Q15649 155 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 LTB4RQ15722 352 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 NRF1Q16656 503 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CYBRD1Q53TN4 286 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SFT2D3Q587I9 215 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CMPK2Q5EBM0 449 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OTUD3Q5T2D3 398 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 WLSQ5T9L3 541 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 KRT80Q6KB66 452 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 REEP3Q6NUK4 255 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDC73Q6P1J9 531 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 WDR74Q6RFH5 385 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CYP4Z1Q86W10 505 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 HIPK1Q86Z02 1210 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARMC8Q8IUR7 673 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR4N5Q8IXE1 308 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF595Q8IYB9 648 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAML2Q8IZL2 1156 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TAGAPQ8N103 731 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC25A45Q8N413 288 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SVOPLQ8N434 492 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CBR4Q8N4T8 237 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PACRGLQ8N7B6 248 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM86B1Q8N7N1 296 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 COX18Q8N8Q8 333 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ANKFN1Q8N957 763 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PAPD5Q8NDF8 572 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR5D16Q8NGK9 328 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR5K1Q8NHB7 308 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 LILRB1Q8NHL6 650 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PSMA8Q8TAA3 256 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM110BQ8TC76 370 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SAP25Q8TEE9 199 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 GEMIN6Q8WXD5 167 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 NR4A3Q92570 626 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 PROX1Q92786 737 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TANKQ92844 425 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 RAB8BQ92930 207 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 UCN3Q969E3 161 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAL2Q969L2 176 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMBIM1Q969X1 311 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TBC1D20Q96BZ9 403 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ELP4Q96EB1 424 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OTUB1Q96FW1 271 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 SMIM10Q96HG1 83 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM19Q96HH6 336 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CNDP2Q96KP4 475 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 C10orf90Q96M02 699 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CNBD2Q96M20 576 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF570Q96NI8 536 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 COL21A1Q96P44 957 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 BTBD9Q96Q07 612 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR7D2Q96RA2 312 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CTDSP1Q9GZU7 261 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHRNA10Q9GZZ6 450 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARRDC1-AS1Q9H2J1 176 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 LRRN3Q9H3W5 708 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 COQ10BQ9H8M1 238 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHODLQ9H9P2 273 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF556Q9HAH1 456 aa3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLK4Q9HAZ1 481 aaKnown RBP3.47□□□□□ -1.85
HMGB3P20-201ENST00000417997 ADAP2Q9NPF8 381 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms