RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ALG10BQ5I7T1 473 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 ZNF474Q6S9Z5 364 aaPredicted RBP16.49■□□□□ 0.23
CHTOP-202ENST00000368687 TUSC5Q8IXB3 177 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 SMYD1Q8NB12 490 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 SLC47A1Q96FL8 570 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 ZNF583Q96ND8 569 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 LRRC37BQ96QE4 947 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 USB1Q9BQ65 265 aaKnown RBP16.49■□□□□ 0.23
CHTOP-202ENST00000368687 GPATCH1Q9BRR8 931 aaKnown RBP16.49■□□□□ 0.23
CHTOP-202ENST00000368687 OR10A4Q9H209 315 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 PIF1Q9H611 641 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 CRIM1Q9NZV1 1036 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 CSMD2Q7Z408 3487 aa16.49■□□□□ 0.23
CHTOP-202ENST00000368687 FRS3O43559 492 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 OR2T1O43869 369 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 TPST1O60507 370 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 AHSA1O95433 338 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 UGT2B10P36537 528 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 NUDT2P50583 147 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 H3F3AP84243 136 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 DAZAP2Q15038 168 aaPredicted RBP16.48■□□□□ 0.23
CHTOP-202ENST00000368687 NRF1Q16656 503 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 C1orf140Q5VVS0 124 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 ZNF613Q6PF04 617 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 PIGWQ7Z7B1 504 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 GALNT5Q7Z7M9 940 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 ANKS4BQ8N8V4 417 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 ZNF610Q8N9Z0 462 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 PROX1Q92786 737 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 EPYCQ99645 322 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 ARHGDIGQ99819 225 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 HDHD5Q9BXW7 423 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 TACC2O95359 2948 aa16.48■□□□□ 0.23
CHTOP-202ENST00000368687 IGHV3-15A0A0B4J1V0 119 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 A0A1B0GWA3 101 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 ELOVL7A1L3X0 281 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 SH3D21A4FU49 640 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 LIPT2A6NK58 231 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 NPIPB7O75200 414 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 VAMP5O95183 116 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 FPR1P21462 350 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 GTF2E2P29084 291 aaKnown RBP16.47■□□□□ 0.23
CHTOP-202ENST00000368687 MFSD13AQ14CX5 517 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 DUSP7Q16829 419 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 GLIPR1L2Q4G1C9 344 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 GKAP1Q5VSY0 366 aaPredicted RBP16.47■□□□□ 0.23
CHTOP-202ENST00000368687 TREML1Q86YW5 311 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 LURAP1LQ8IV03 231 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 MFSD8Q8NHS3 518 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 SLC38A4Q969I6 547 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 TAMM41Q96BW9 452 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 SF3B5Q9BWJ5 86 aaKnown RBP16.47■□□□□ 0.23
CHTOP-202ENST00000368687 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
CHTOP-202ENST00000368687 POLR2J3Q9H1A7 115 aaKnown RBP16.47■□□□□ 0.23
CHTOP-202ENST00000368687 C12orf49Q9H741 205 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 ZNF226Q9NYT6 803 aa16.47■□□□□ 0.23
CHTOP-202ENST00000368687 A0A0B4J2E0 115 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 A0A1B0GX12 115 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 ZC3H12DA2A288 527 aaKnown RBP16.46■□□□□ 0.23
CHTOP-202ENST00000368687 CASKO14936 926 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 GCM2O75603 506 aaPredicted RBP16.46■□□□□ 0.23
CHTOP-202ENST00000368687 FAM107AO95990 144 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 OPN1SWP03999 348 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 IMPDH2P12268 514 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 HTR2AP28223 471 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 HOXC5Q00444 222 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 FAM27E3Q08E93 113 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 P2RY6Q15077 328 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 OR1Q1Q15612 314 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 TFAP2EQ6VUC0 442 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 SSX8Q7RTT4 187 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 MICU2Q8IYU8 434 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 OR6S1Q8NH40 331 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 LZICQ8WZA0 190 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 PCDHAC1Q9H158 963 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 SPAG4Q9NPE6 437 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 PARPBPQ9NWS1 579 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 NDE1Q9NXR1 346 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 GPR52Q9Y2T5 361 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 NOSIPQ9Y314 301 aaKnown RBP16.46■□□□□ 0.23
CHTOP-202ENST00000368687 TESMINQ9Y4I5 508 aa16.46■□□□□ 0.23
CHTOP-202ENST00000368687 A0A087WUJ7 227 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 AQP7P3A6NL99 342 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 A6NNC1 897 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 PSMB1P20618 241 aaKnown RBP16.45■□□□□ 0.22
CHTOP-202ENST00000368687 CD247P20963 164 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 OR3A2P47893 321 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 MNAT1P51948 309 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 CEACAM7Q14002 265 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 OR7A5Q15622 319 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 EXOC3L2Q2M3D2 409 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 OTUD3Q5T2D3 398 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-202ENST00000368687 FAM69AQ5T7M9 428 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 C8orf82Q6P1X6 216 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-202ENST00000368687 Q6ZT83 130 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 COMTD1Q86VU5 262 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 TMEM200AQ86VY9 491 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 SLC15A3Q8IY34 581 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 ZNF100Q8IYN0 542 aa16.45■□□□□ 0.22
CHTOP-202ENST00000368687 GPR32P1Q8NGA4 272 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms