RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NPRL2Q8WTW4 380 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 NUDT8Q8WV74 236 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 LCN9Q8WX39 176 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 GAL3ST3Q96A11 431 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 PHYHIPLQ96FC7 376 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TPD52L3Q96J77 140 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TRIM2Q9C040 744 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 LAT2Q9GZY6 243 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 FKRPQ9H9S5 495 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM138Q9NPI0 162 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM161AQ9NX61 479 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 H2AFY2Q9P0M6 372 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-201ENST00000316433 FZD4Q9ULV1 537 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 FLVCR2Q9UPI3 526 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 RAI2Q9Y5P3 530 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 SPIN1Q9Y657 262 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-201ENST00000316433 CCDC187A0A096LP49 1063 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 LRRC14BA6NHZ5 514 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF726A6NNF4 738 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF705EA8MWA4 302 aaPredicted RBP6.15□□□□□ -1.43
ZNF540-201ENST00000316433 M0R143 59 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 CTNSO60931 367 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 STK16O75716 305 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 C1SP09871 688 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 SLC35G4P0C7Q5 338 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ERGP11308 486 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ADH6P28332 368 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 AGTR2P50052 363 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 HGFACQ04756 655 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 KIAA0141Q14154 515 aaPredicted RBP6.15□□□□□ -1.43
ZNF540-201ENST00000316433 GINS1Q14691 196 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 TGIF1Q15583 401 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ISXQ2M1V0 245 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 NKAPLQ5M9Q1 402 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ADAM5Q6NVV9 412 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 PAQR6Q6TCH4 344 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 PRSS55Q6UWB4 352 aaPredicted RBP6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF765Q7L2R6 523 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 LINGO2Q7L985 606 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 SZRD1Q7Z422 152 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 GID4Q8IVV7 300 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ADPRHL1Q8NDY3 354 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 OR51S1Q8NGJ8 323 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 SCAMP5Q8TAC9 235 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 GEMIN6Q8WXD5 167 aaKnown RBP6.15□□□□□ -1.43
ZNF540-201ENST00000316433 EXT2Q93063 718 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 ARL11Q969Q4 196 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 OR52E6Q96RD3 313 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 OR52A5Q9H2C5 316 aa6.15□□□□□ -1.43
ZNF540-201ENST00000316433 SEPSECSQ9HD40 501 aaKnown RBP6.15□□□□□ -1.43
ZNF540-201ENST00000316433 CDRT15L2A8MXV6 281 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SEC14L6B5MCN3 397 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SYT5O00445 386 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CREBL2O60519 120 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF821O75541 412 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ARAFP10398 606 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SERPINF1P36955 418 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 WNT5AP41221 380 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 KIR3DL1P43629 444 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TRA2BP62995 288 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ARF5P84085 180 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 FABP5Q01469 135 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SNTB2Q13425 540 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SPANXN4Q5MJ08 99 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 FBXW9Q5XUX1 488 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 GLDNQ6ZMI3 551 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SMIM15Q7Z3B0 74 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 VTCN1Q7Z7D3 282 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OAFQ86UD1 273 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C1QL4Q86Z23 238 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 FAM26EQ8N5C1 309 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SLC5A8Q8N695 610 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C19orf47Q8N9M1 422 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SIDT2Q8NBJ9 832 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 HJURPQ8NCD3 748 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR11G2Q8NGC1 345 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR1N1Q8NGS0 311 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 METTL21AQ8WXB1 218 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SCLYQ96I15 445 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ABHD1Q96SE0 405 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TMEM231Q9H6L2 316 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C1GALT1Q9NS00 363 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 KLK14Q9P0G3 267 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RCC2Q9P258 522 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CHRNA9Q9UGM1 479 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ADAM29Q9UKF5 820 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SLC27A6Q9Y2P4 619 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SF3B6Q9Y3B4 125 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SNX11Q9Y5W9 270 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 BPTFQ12830 3046 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 A0A1W2PPH5 198 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ADM5C9JUS6 153 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ANHXE9PGG2 379 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SULT2B1O00204 365 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TP53I11O14683 189 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SURF4O15260 269 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ENTPD6O75354 484 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 EIF4EP06730 217 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CTHP32929 405 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 LUMP51884 338 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms