RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 DPRXA6NFQ7 191 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 BCHEP06276 602 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 IMPDH2P12268 514 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 HOXB4P17483 251 aaPredicted RBP16.11■□□□□ 0.17
TMEM88-201ENST00000301599 COX5AP20674 150 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 BSPH1Q075Z2 132 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 OR9I1Q8NGQ6 314 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 LRRC8CQ8TDW0 803 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 GTF2H4Q92759 462 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 FBXW5Q969U6 566 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 RAD21L1Q9H4I0 556 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 ASB6Q9NWX5 421 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 IFT52Q9Y366 437 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 PCDHB14Q9Y5E9 798 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 DSPPQ9NZW4 1301 aa16.11■□□□□ 0.17
TMEM88-201ENST00000301599 RAI1Q7Z5J4 1906 aaPredicted RBP16.1■□□□□ 0.17
TMEM88-201ENST00000301599 CIB4A0PJX0 185 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 OR5H1A6NKK0 313 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 CCT8L1PA6NM43 557 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 H7C1Q1 480 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 IGHV3-9P01782 118 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 THBS1P07996 1170 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 GKN3PP0CG01 181 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 NTF4P34130 210 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 ACAA2P42765 397 aaKnown RBP16.1■□□□□ 0.17
TMEM88-201ENST00000301599 ATP5J2P56134 94 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 STX1BP61266 288 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 RPS4XP62701 263 aaKnown RBP16.1■□□□□ 0.17
TMEM88-201ENST00000301599 LTBQ06643 244 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 RGNQ15493 299 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 ZNF672Q499Z4 452 aaPredicted RBP16.1■□□□□ 0.17
TMEM88-201ENST00000301599 GTDC1Q4AE62 458 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 WBP2NLQ6ICG8 309 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 ZNF836Q6ZNA1 936 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 SMAP2Q8WU79 429 aaPredicted RBP16.1■□□□□ 0.17
TMEM88-201ENST00000301599 AURKBQ96GD4 344 aaPredicted RBP16.1■□□□□ 0.17
TMEM88-201ENST00000301599 COX4I2Q96KJ9 171 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 TCF7L2Q9NQB0 619 aa16.1■□□□□ 0.17
TMEM88-201ENST00000301599 CLIC1O00299 241 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 RAMP1O60894 148 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 GPIP06744 558 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 IDUAP35475 653 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 MRPL19P49406 292 aaKnown RBP16.09■□□□□ 0.17
TMEM88-201ENST00000301599 IDH3AP50213 366 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 RNF220Q5VTB9 566 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 OR7E24Q6IFN5 339 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 PAQR6Q6TCH4 344 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 SEZ6L2Q6UXD5 910 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 Q71RC1 249 aaPredicted RBP16.09■□□□□ 0.17
TMEM88-201ENST00000301599 CIARTQ8N365 385 aaPredicted RBP16.09■□□□□ 0.17
TMEM88-201ENST00000301599 CLIP4Q8N3C7 705 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 CADM2Q8N3J6 435 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 DYDC1Q8WWB3 177 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 TRMT61AQ96FX7 289 aaKnown RBP16.09■□□□□ 0.17
TMEM88-201ENST00000301599 TMEM19Q96HH6 336 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 SPATA9Q9BWV2 254 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 PAIP1Q9H074 479 aaKnown RBP16.09■□□□□ 0.17
TMEM88-201ENST00000301599 ZNF443Q9Y2A4 671 aaPredicted RBP16.09■□□□□ 0.17
TMEM88-201ENST00000301599 SLC9A8Q9Y2E8 581 aa16.09■□□□□ 0.17
TMEM88-201ENST00000301599 ZC3H12DA2A288 527 aaKnown RBP16.08■□□□□ 0.16
TMEM88-201ENST00000301599 LY6G6DO95868 133 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 DANCRP0C864 163 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.16
TMEM88-201ENST00000301599 FAPQ12884 760 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 FADDQ13158 208 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 CEACAM7Q14002 265 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 SLC17A1Q14916 467 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 ZNF311Q5JNZ3 666 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 PRAMEF8Q5VWM4 474 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 PRAMEF7Q5VXH5 474 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 SLC2A7Q6PXP3 512 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 ATG4DQ86TL0 474 aaPredicted RBP16.08■□□□□ 0.16
TMEM88-201ENST00000301599 NEUROG1Q92886 237 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 RADILQ96JH8 1075 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 CCDC28BQ9BUN5 200 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 SF3B5Q9BWJ5 86 aaKnown RBP16.08■□□□□ 0.16
TMEM88-201ENST00000301599 TRIM2Q9C040 744 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 BCL2L10Q9HD36 194 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 TAS2R16Q9NYV7 291 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 CISD1Q9NZ45 108 aaKnown RBP16.08■□□□□ 0.16
TMEM88-201ENST00000301599 UPB1Q9UBR1 384 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 MALT1Q9UDY8 824 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 FLVCR1Q9Y5Y0 555 aa16.08■□□□□ 0.16
TMEM88-201ENST00000301599 A0A096LPI6 279 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 A0A1W2PP18 115 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 TRIM64A6NGJ6 449 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 TRIM64BA6NI03 449 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 LIPT2A6NK58 231 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 A8MVM7 634 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 OVOL3O00110 214 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 SMAD7O15105 426 aaKnown RBP16.07■□□□□ 0.16
TMEM88-201ENST00000301599 RAD51DO75771 328 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 HEXAP06865 529 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 RPS26P11Q5JNZ5 115 aaPredicted RBP16.07■□□□□ 0.16
TMEM88-201ENST00000301599 OTUD3Q5T2D3 398 aaPredicted RBP16.07■□□□□ 0.16
TMEM88-201ENST00000301599 TMEM225Q6GV28 225 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 BLOC1S3Q6QNY0 202 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 KLHL17Q6TDP4 642 aa16.07■□□□□ 0.16
TMEM88-201ENST00000301599 CASP12Q6UXS9 341 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms