RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 TRAV1-2A0A0B4J238 106 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 ARL6IP5O75915 188 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 RPP14O95059 124 aaKnown RBP16.53■□□□□ 0.24
TRAF4-201ENST00000262395 TNFRSF17Q02223 184 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 LINC00303Q3SY05 128 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 TMPRSS11FQ6ZWK6 438 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 MEIOBQ8N635 442 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 LCN9Q8WX39 176 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 SMARCD2Q92925 531 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 SLC25A38Q96DW6 304 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 ZNF350Q9GZX5 532 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 MCCC2Q9HCC0 563 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 POMT2Q9UKY4 750 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 MRPS2Q9Y399 296 aaKnown RBP16.53■□□□□ 0.24
TRAF4-201ENST00000262395 L7N2F9 121 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 PTP4A3O75365 173 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 ATP1B1P05026 303 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 SRMP19623 302 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 SRSF5Q13243 272 aaKnown RBP16.53■□□□□ 0.24
TRAF4-201ENST00000262395 NOGQ13253 232 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 UBE2NLQ5JXB2 153 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 FAM199XQ6PEV8 388 aaPredicted RBP16.53■□□□□ 0.24
TRAF4-201ENST00000262395 TMEM52Q8NDY8 209 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 DNAAF1Q8NEP3 725 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 OR5T3Q8NGG3 340 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 TSPAN10Q9H1Z9 355 aaPredicted RBP16.53■□□□□ 0.24
TRAF4-201ENST00000262395 LIN7BQ9HAP6 207 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 PCDHGA5Q9Y5G8 931 aa16.53■□□□□ 0.24
TRAF4-201ENST00000262395 A0A1B0GWA3 101 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 CEACAM5P06731 702 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 DBIP07108 87 aaKnown RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 UCHL1P09936 223 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 CD53P19397 219 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 AK4P27144 223 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 ARFIP1P53367 373 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 PSMA6P60900 246 aaKnown RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 DYRK1AQ13627 763 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 HTR4Q13639 388 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 ZMYND11Q15326 602 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 AGBL4Q5VU57 503 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 PRSS42Q7Z5A4 293 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 SLC35F2Q8IXU6 374 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 RNF113BQ8IZP6 322 aaKnown RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 NMNAT3Q96T66 252 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 ACTR6Q9GZN1 396 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 NRIP3Q9NQ35 241 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 C2orf42Q9NWW7 574 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 LYARQ9NX58 379 aaKnown RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 PIPOXQ9P0Z9 390 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 DPP7Q9UHL4 492 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 ARID1BQ8NFD5 2236 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 MCIDASD6RGH6 385 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 FMO6PO60774 539 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 TMIGD3P0DMS9 266 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 CPMP14384 443 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 SOX2P48431 317 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 STK11Q15831 433 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 HYAL4Q2M3T9 481 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 TUSC1Q2TAM9 212 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 PSRC1Q6PGN9 363 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-201ENST00000262395 C1orf216Q8TAB5 229 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 OR1F2PQ96R84 312 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 TMEM27Q9HBJ8 222 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 NANSQ9NR45 359 aa16.52■□□□□ 0.24
TRAF4-201ENST00000262395 RANBP2P49792 3224 aaKnown RBP16.52■□□□□ 0.23
TRAF4-201ENST00000262395 CHURC1-FNTBB4DL54 471 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 SERPINA3P01011 423 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 CT62P0C5K7 136 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 EMDP50402 254 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 NDUFAF6Q330K2 333 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 C3P1Q6ZMU1 363 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 SLC6A17Q9H1V8 727 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 PHPT1Q9NRX4 125 aaPredicted RBP16.52■□□□□ 0.23
TRAF4-201ENST00000262395 SDHAF2Q9NX18 166 aa16.52■□□□□ 0.23
TRAF4-201ENST00000262395 OGG1O15527 345 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 FGF17O60258 216 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 RPL4P36578 427 aaKnown RBP16.51■□□□□ 0.23
TRAF4-201ENST00000262395 PLA2G7Q13093 441 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 MELKQ14680 651 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 ODF4Q2M2E3 257 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 ZNF425Q6IV72 752 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 CMIPQ8IY22 773 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 SYNPRQ8TBG9 265 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 CNN2Q99439 309 aaKnown RBP16.51■□□□□ 0.23
TRAF4-201ENST00000262395 HDAC8Q9BY41 377 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 TRPV4Q9HBA0 871 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 TCRBV16S1A1N1A0A5B0 115 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 SLC31A1O15431 190 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 ARPC5O15511 151 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 CTSVO60911 334 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 KRT33AO76009 404 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 FGF19O95750 216 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 THBS1P07996 1170 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 HOXD4P09016 255 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-201ENST00000262395 CTNNB1P35222 781 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 ADH7P40394 386 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 ACTC1P68032 377 aa16.51■□□□□ 0.23
TRAF4-201ENST00000262395 ACTA1P68133 377 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms