RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.38
SCARB2-227ENST00000640957 GPR1P46091 355 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 PDX1P52945 283 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 TGIF1Q15583 401 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 MANEAQ5SRI9 462 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 PRAMEF13Q5VWM6 474 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 MRM1Q6IN84 353 aaKnown RBP12.71□□□□□ -0.38
SCARB2-227ENST00000640957 NIPAL3Q6P499 406 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF783Q6ZMS7 281 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 CMIPQ8IY22 773 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 OSTF1Q92882 214 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 SLC41A3Q96GZ6 507 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 EFCAB11Q9BUY7 163 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.38
SCARB2-227ENST00000640957 LRIT2A6NDA9 550 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 WASH3PC4AMC7 463 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 IGHA1P01876 353 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 MAS1P04201 325 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 BMP7P18075 431 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PITPNAQ00169 270 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 NDUFA9Q16795 377 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 TPGS2Q68CL5 300 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ZC3H14Q6PJT7 736 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ETV3LQ6ZN32 361 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 MEPCEQ7L2J0 689 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 LDLRAD3Q86YD5 345 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 OR9A2Q8NGT5 310 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PELOQ9BRX2 385 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PTTG3PQ9NZH4 202 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 OPN4Q9UHM6 478 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 AGPAT2O15120 278 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SIGLEC6O43699 453 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SOCS5O75159 536 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 KRT33AO76009 404 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 FARS2O95363 451 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 FGBP02675 491 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ATP1B1P05026 303 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PPP3CBP16298 524 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SYN1P17600 705 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 CDK2P24941 298 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ART1P52961 327 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 FLI1Q01543 452 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ST3GAL3Q11203 375 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 MPP7Q5T2T1 576 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 KHDRBS2Q5VWX1 349 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 WDR88Q6ZMY6 472 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 CDH26Q8IXH8 852 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 C12orf76Q8N812 135 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 IL17RCQ8NAC3 791 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 OR6K6Q8NGW6 343 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 FCAMRQ8WWV6 532 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 VOPP1Q96AW1 172 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 RGMAQ96B86 450 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 CXorf40BQ96DE9 158 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PGLYRP3Q96LB9 341 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 C7orf50Q9BRJ6 194 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 PLEKHM1Q9Y4G2 1056 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 RTTNQ86VV8 2226 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 TTLL8A6PVC2 850 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 DOK2O60496 412 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ABLIM3O94929 683 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 HIST1H2ABP04908 130 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 MEOX2P50222 304 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 FXYD6P3P58550 94 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF85Q03923 595 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 KRT33BQ14525 404 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 HIST3H2AQ7L7L0 130 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 OR5M9Q8NGP3 310 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 OR1S2Q8NGQ3 325 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SNX33Q8WV41 574 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 NSMAFQ92636 917 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 HIST1H2ACQ93077 130 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SLC25A38Q96DW6 304 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 AMDHD1Q96NU7 426 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 MS4A4EQ96PG1 132 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 ANKRD19PQ9H560 264 aa12.7□□□□□ -0.38
SCARB2-227ENST00000640957 DHCR7Q9UBM7 475 aaKnown RBP12.7□□□□□ -0.38
SCARB2-227ENST00000640957 SLC16A5O15375 505 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 OR2T1O43869 369 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 CDC123O75794 336 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 FGF18O76093 207 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 ZIC2O95409 532 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 UGT2B7P16662 529 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 PNLIPRP1P54315 467 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 CBFBQ13951 182 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 FNDC3BQ53EP0 1204 aaKnown RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 SLC16A11Q8NCK7 471 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 OR51S1Q8NGJ8 323 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 OR9A1PQ8NGU1 263 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms