RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SLC19A3Q9BZV2 496 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 EXO5Q9H790 373 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 NTN4Q9HB63 628 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 VNN3Q9NY84 501 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 STOML1Q9UBI4 398 aa17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 SAMHD1Q9Y3Z3 626 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-221ENST00000622702 TRBV4-1A0A0J9YWV2 114 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 A8MVM7 634 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 H3BML4 177 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 TNFRSF11BO00300 401 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 GNGT2O14610 69 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 PEPDP12955 493 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 CCNA2P20248 432 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 POU3F2P20265 443 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 EGR4Q05215 589 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 CRYZQ08257 329 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 SYT14P1Q58G82 188 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 ARHGAP11AQ6P4F7 1023 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 TTC33Q6PID6 262 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 GHDCQ8N2G8 530 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 OR52J3Q8NH60 311 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 TMEM255BQ8WV15 326 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 TMEM239Q8WW34 195 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 EPYCQ99645 322 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 BDH2Q9BUT1 245 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 SPRR3Q9UBC9 169 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 MPDZO75970 2070 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 ZGRF1Q86YA3 2104 aa17.86■□□□□ 0.45
PDLIM2-221ENST00000622702 ESPL1Q14674 2120 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 A0A087WUU8 490 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 GJE1A6NN92 205 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 LHX2P50458 406 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 DCST1Q5T197 706 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 HMBOX1Q6NT76 420 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 PODNL1Q6PEZ8 512 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 RNF113BQ8IZP6 322 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 PQLC1Q8N2U9 271 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 DDIT4LQ96D03 193 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 CENPNQ96H22 339 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 ALPK1Q96QP1 1244 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 PKP2Q99959 881 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 POTEKPQ9BYX7 375 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 TMEM185BQ9H7F4 350 aa17.85■□□□□ 0.45
PDLIM2-221ENST00000622702 SH3PXD2BA1X283 911 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 ZC3H12DA2A288 527 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 OR14I1A6ND48 311 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 IGF2P01344 180 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 ZNF708P17019 499 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 SHC1P29353 583 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 DNAJA1P31689 397 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 STARP49675 285 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 UGT2B15P54855 530 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 HSF1Q00613 529 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 FOXD4Q12950 439 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 RCN1Q15293 331 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 EXOC3L2Q2M3D2 409 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 MBOAT2Q6ZWT7 520 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 AMIGO2Q86SJ2 522 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 GGNQ86UU5 652 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 ATP6V1C2Q8NEY4 427 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 KLHL15Q96M94 604 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 TIMP4Q99727 224 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 OR11A1Q9GZK7 315 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 DCLRE1BQ9H816 532 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 TMCC3Q9ULS5 477 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 OSGIN2Q9Y236 505 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 MED31Q9Y3C7 131 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 HDGFL3Q9Y3E1 203 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 U3KQV3 271 aa17.84■□□□□ 0.45
PDLIM2-221ENST00000622702 A0A1B0GTH9 108 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 HTR3EA5X5Y0 456 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 CPN1P15169 458 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 FPR1P21462 350 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 SFTPDP35247 375 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 IST1P53990 364 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 CLDN18P56856 261 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 CLDN20P56880 219 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 RBPJQ06330 500 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 SEC23BQ15437 767 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 TMEM176BQ3YBM2 270 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 C1orf140Q5VVS0 124 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 ZNF730Q6ZMV8 503 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 ESPNLQ6ZVH7 1005 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 LSRQ86X29 649 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 CHERPQ8IWX8 916 aaKnown RBP17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 SMPDL3BQ92485 455 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 SARAFQ96BY9 339 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 NRBF2Q96F24 287 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 ARL5BQ96KC2 179 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 KLHL4Q9C0H6 718 aa17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 MEPEQ9NQ76 525 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 C6orf203Q9P0P8 240 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-221ENST00000622702 TRAV36DV7A0A075B6V5 113 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 H0Y3Z8 333 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 ZNHIT1O43257 154 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 MGRN1O60291 552 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 E2F6O75461 281 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 AHSA1O95433 338 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 TFPIP10646 304 aa17.82■□□□□ 0.44
PDLIM2-221ENST00000622702 LSM11P83369 360 aaKnown RBP eCLIP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms