RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CSNK2A1P68400 391 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CHRNB3Q05901 458 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GABPAQ06546 454 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GAGE1Q13065 139 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ARHGEF7Q14155 803 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GAMTQ14353 236 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 NDUFAF6Q330K2 333 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 NKAPLQ5M9Q1 402 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 NCMAPQ5T1S8 102 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OTUD1Q5VV17 481 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CARD17Q5XLA6 110 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CDC42EP5Q6NZY7 148 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 QSOX2Q6ZRP7 698 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 SLC35F3Q8IY50 421 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF444Q8N0Y2 327 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 DNAJC5GQ8N7S2 189 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RASGEF1AQ8N9B8 481 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CSNK2A3Q8NEV1 391 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 DNERQ8NFT8 737 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OR10A7Q8NGE5 316 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OR5K1Q8NHB7 308 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF675Q8TD23 568 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RAB3CQ96E17 227 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MS4A4EQ96PG1 132 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RBBP8Q99708 897 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ELOVL1Q9BW60 279 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 STRADBQ9C0K7 418 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ELOVL4Q9GZR5 314 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OR51J1Q9H342 316 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 FN3KQ9H479 309 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RNF122Q9H9V4 155 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GKN1Q9NS71 199 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ASB1Q9Y576 335 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TNFRSF18Q9Y5U5 241 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CDH10Q9Y6N8 788 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MEIKINA0A087WXM9 373 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 A0A0A6YYH2 397 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 C7orf66A4D0T2 115 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CLEC18AA5D8T8 446 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM150BA6NC51 233 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MANSC4A6NHS7 340 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 A6NJ64 397 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 HEPACAM2A8MVW5 462 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 G3V2L1 256 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 AP4M1O00189 453 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 B4GALT5O43286 388 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 C8orf89P0DMQ9 161 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RAP2AP10114 183 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF44P15621 663 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CALCRP30988 508 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GKP32189 559 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CEACAM6P40199 344 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RGRP47804 291 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ACLYP53396 1101 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 PNLIPRP2P54317 469 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RAG2P55895 527 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 DCDP81605 110 aaKnown RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 E2F1Q01094 437 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CXCL9Q07325 125 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 SURF2Q15527 256 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RSPO4Q2I0M5 234 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CARD16Q5EG05 197 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TFDP3Q5H9I0 405 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CERCAMQ5T4B2 595 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF57Q68EA5 555 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 LCLAT1Q6UWP7 414 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CLEC18BQ6UXF7 455 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 NHLRC1Q6VVB1 395 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 COLCA1Q6ZS62 124 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RNF165Q6ZSG1 346 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RNF44Q7L0R7 432 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 GPRIN1Q7Z2K8 1008 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 CLEC18CQ8NCF0 446 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 C2CD4AQ8NCU7 369 aaPredicted RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 FAM46DQ8NEK8 389 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 PXT1Q8NFP0 134 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OR9I1Q8NGQ6 314 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 C16orf78Q8WTQ4 265 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MITD1Q8WV92 249 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TM9SF4Q92544 642 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ESAMQ96AP7 390 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 RGMAQ96B86 450 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MOCOSQ96EN8 888 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 SNX22Q96L94 193 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OR2M2Q96R28 347 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 INPP5KQ9BT40 448 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM208Q9BTX3 173 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 IL22Q9GZX6 179 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM185BQ9H7F4 350 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 PLAC1Q9HBJ0 212 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 TREX1Q9NSU2 369 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 DKK4Q9UBT3 224 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 MOKQ9UQ07 419 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 URGCP-MRPS24S4R325 110 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 LOXHD1Q8IVV2 1947 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF638Q14966 1978 aaKnown RBP4.37□□□□□ -1.71
LINC01109-201ENST00000603837 OTOFQ9HC10 1997 aa4.37□□□□□ -1.71
LINC01109-201ENST00000603837 IQCMA0A1B0GVH7 501 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms