RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SNX5Q9Y5X3 404 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 HEATR5AQ86XA9 2040 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TMED7-TICAM2A0A0A6YYA0 188 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TLX2O43763 284 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 PRKYO43930 277 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TRMUO75648 421 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 LIPCP11150 499 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 ALDH3B2P48448 385 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 EGR4Q05215 589 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 DCAF10Q5QP82 559 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 ADGRG3Q86Y34 549 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 GPALPP1Q8IXQ4 340 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 CYP4Z2PQ8N1L4 340 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 SIRT6Q8N6T7 355 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TMEM163Q8TC26 289 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 PSMF1Q92530 271 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 SGCDQ92629 289 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 FER1L6-AS2Q96M78 137 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 CDV3Q9UKY7 258 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TMED7Q9Y3B3 224 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 CEPT1Q9Y6K0 416 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TRAV27A0A087WT01 109 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 CLCA1A8K7I4 914 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC25A12O75746 678 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 PRKCAP17252 672 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 GRK5P34947 590 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 AIMP2Q13155 320 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 FHL1Q13642 323 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 ZNF74Q16587 644 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 B3GNTL1Q67FW5 361 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC46A3Q7Z3Q1 461 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 LSRQ86X29 649 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 SPARTQ8N0X7 666 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 NTNG2Q96CW9 530 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 MCCC2Q9HCC0 563 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 ERVK-18Q9QC07 812 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 BAIAP2Q9UQB8 552 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 PCSK5Q92824 1860 aa16.03■□□□□ 0.16
SHKBP1-224ENST00000600718 B4DXG7 233 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 ETV2O00321 342 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 BHLHE40O14503 412 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 SURF4O15260 269 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 ENTPD6O75354 484 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 HTR1AP08908 422 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 CCNA2P20248 432 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC6A6P31641 620 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 APOBEC1P41238 236 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 ST13P50502 369 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 TGIF1Q15583 401 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 KCTD8Q6ZWB6 473 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 LNX2Q8N448 690 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 OR2M3Q8NG83 312 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 GGHQ92820 318 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 FGF11Q92914 225 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 MYDGFQ969H8 173 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 PLEKHA8Q96JA3 519 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 ENKD1Q9H0I2 346 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 FKBP14Q9NWM8 211 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 IL20RAQ9UHF4 553 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 TEKT2Q9UIF3 430 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 KNTC1P50748 2209 aa16.02■□□□□ 0.16
SHKBP1-224ENST00000600718 TRAV36DV7A0A075B6V5 113 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 A8MVM7 634 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 RGS10O43665 173 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 SUSD5O60279 629 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 NDUFB2O95178 105 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 LIFP15018 202 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF41P51814 821 aaPredicted RBP16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 NUDT6P53370 316 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 PIGFQ07326 219 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 RTP5Q14D33 572 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 SLC25A53Q5H9E4 307 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 PRAMEF20Q5VT98 475 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 POMZP3Q6PJE2 187 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 C5orf46Q6UWT4 87 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 THSD4Q6ZMP0 1018 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 ERI1Q8IV48 349 aaKnown RBP16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 C10orf53Q8N6V4 93 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 LRRC17Q8N6Y2 441 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 FADS6Q8N9I5 356 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 STK35Q8TDR2 534 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 IFT27Q9BW83 186 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 CCDC90BQ9GZT6 254 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 NANSQ9NR45 359 aa16.02■□□□□ 0.15
SHKBP1-224ENST00000600718 TMEM72A0PK05 275 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 EFCAB10A6NFE3 127 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 FAM47E-STBD1D6RA91 191 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 LRRN3E7EW58 273 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 CCL3P10147 92 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 JUNBP17275 347 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 MAP2K6P52564 334 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 ANKDD1AQ495B1 522 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF468Q5VIY5 522 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 ARSKQ6UWY0 536 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 PRSS48Q7RTY5 328 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 WDSUB1Q8N9V3 476 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 OR4K17Q8NGC6 315 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 TAAR8Q969N4 342 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 KTI12Q96EK9 354 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms