RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GP1BBP13224 206 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 CXCR1P25024 350 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 ABCD3P28288 659 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 MSX1P28360 303 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 OPRL1P41146 370 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 TMED10P49755 219 aaKnown RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 P2RX1P51575 399 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 PPP5CP53041 499 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 RPS4XP62701 263 aaKnown RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 ZFP36L1Q07352 338 aaKnown RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 GALEQ14376 348 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 PON3Q15166 354 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 PWWP2BQ6NUJ5 590 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 TMEM205Q6UW68 189 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 THSD4Q6ZMP0 1018 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 DBX2Q6ZNG2 339 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 TMPRSS9Q7Z410 1059 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 SLC15A4Q8N697 577 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 ZNF485Q8NCK3 441 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 NFAM1Q8NET5 270 aaPredicted RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 FNDC8Q8TC99 324 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 HAVCR2Q8TDQ0 301 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 PTP4A1Q93096 173 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 PPP1R14BQ96C90 147 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 KCTD7Q96MP8 289 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 ERMAPQ96PL5 475 aaPredicted RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 CENPOQ9BU64 300 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 NUAK2Q9H093 628 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 SYNDIG1Q9H7V2 258 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 FKRPQ9H9S5 495 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 EXOSC4Q9NPD3 245 aaKnown RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 NRIP3Q9NQ35 241 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 NANSQ9NR45 359 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 SDHAF3Q9NRP4 125 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 BABAM2Q9NXR7 383 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 CTSFQ9UBX1 484 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 CHRNA9Q9UGM1 479 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 GPN3Q9UHW5 284 aaPredicted RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 ZNF229Q9UJW7 825 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 RALYQ9UKM9 306 aaKnown RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 CARD8Q9Y2G2 431 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 HIF3AQ9Y2N7 669 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 PCDHGA5Q9Y5G8 931 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 NPFFR2Q9Y5X5 522 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 KMT2EQ8IZD2 1858 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 ANKRD11Q6UB99 2663 aaPredicted RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 NCOR2Q9Y618 2525 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 WDR87Q6ZQQ6 2873 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 DMXL1Q9Y485 3027 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 TRAV27A0A087WT01 109 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MED19A0JLT2 244 aaPredicted RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 DAPL1A0PJW8 107 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ISPDA4D126 451 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 TMEM221A6NGB7 291 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 D6RAR5 112 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 M0R296 226 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MEN1O00255 615 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 HCRTR2O43614 444 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 FADS1O60427 444 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 SLC2A10O95528 541 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 PPP1R3DO95685 299 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 TXNDC12O95881 172 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 IGHEP01854 428 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MT-ND5P03915 603 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 HIST1H2ABP04908 130 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CD14P08571 375 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 OR2T7P0C7T2 308 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 SLC2A5P22732 501 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 EVI2BP34910 448 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 RPL4P36578 427 aaKnown RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 ETV6P41212 452 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CENPAP49450 140 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CCR4P51679 360 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MLLT10P55197 1068 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 DLX5P56178 289 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 RPS7P62081 194 aaKnown RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 MC2RQ01718 297 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 HSF2Q03933 536 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 C17orf67Q0P5P2 114 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 KRR1Q13601 381 aaKnown RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 FHL1Q13642 323 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 GGTLC2Q14390 218 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CD226Q15762 336 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 INAQ16352 499 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ZNF74Q16587 644 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.49□□□□□ -0.89
VPS25-203ENST00000589520 KLHL12Q53G59 568 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ZNF362Q5T0B9 420 aaPredicted RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 SLC35F1Q5T1Q4 408 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 PHF19Q5T6S3 580 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 LIPKQ5VXJ0 399 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 GPR139Q6DWJ6 353 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MRPL14Q6P1L8 145 aaKnown RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 CD200R1LQ6Q8B3 271 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ZNF322Q6U7Q0 402 aaPredicted RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 HIST3H2AQ7L7L0 130 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 FAM98AQ8NCA5 519 aaKnown RBP9.49□□□□□ -0.89
VPS25-203ENST00000589520 ZBTB44Q8NCP5 570 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 OR4F15Q8NGB8 312 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms