RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SLCO4A1Q96BD0 722 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ZG16BQ96DA0 208 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 NPAS1Q99742 590 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 KLHDC3Q9BQ90 382 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ARMC1Q9NVT9 282 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 CRIM1Q9NZV1 1036 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 BAG5Q9UL15 447 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ICAM5Q9UMF0 924 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF175Q9Y473 711 aa13□□□□□ -0.33
COMMD4-225ENST00000569245 INTS1Q8N201 2190 aaKnown RBP13□□□□□ -0.33
COMMD4-225ENST00000569245 TUBAL3A6NHL2 446 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 ENO4A6NNW6 628 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 H3BNX3 289 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 TNFSF11O14788 317 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 EIF4E2O60573 245 aaKnown RBP12.99□□□□□ -0.33
COMMD4-225ENST00000569245 KRT36O76013 467 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 SYNGR4O95473 234 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 PLGP00747 810 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-225ENST00000569245 OPN1SWP03999 348 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 SEMG1P04279 462 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 CRHP06850 196 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 DBIP07108 87 aaKnown RBP12.99□□□□□ -0.33
COMMD4-225ENST00000569245 THBS1P07996 1170 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 LINGO3P0C6S8 592 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 RAP2AP10114 183 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 FCGR2AP12318 317 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 PRKAR1BP31321 381 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 SIRPAP78324 504 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 CHRNB3Q05901 458 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 FOXF1Q12946 379 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF141Q15928 474 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 DUSP7Q16829 419 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 PDSS1Q5T2R2 415 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 DHRS4L2Q6PKH6 230 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 GGNQ86UU5 652 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 FAM86B1Q8N7N1 296 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 ATP6V1C2Q8NEY4 427 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 OR52P1PQ8NH57 321 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 OR5W2Q8NH69 310 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 POC1BQ8TC44 478 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 PYDC1Q8WXC3 89 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 HSH2DQ96JZ2 352 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 RSPO3Q9BXY4 272 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-225ENST00000569245 DCLRE1BQ9H816 532 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 CACYBPQ9HB71 228 aaKnown RBP12.99□□□□□ -0.33
COMMD4-225ENST00000569245 JKAMPQ9P055 326 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 MCTS1Q9ULC4 181 aaKnown RBP12.99□□□□□ -0.33
COMMD4-225ENST00000569245 AP4S1Q9Y587 144 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 CSMD1Q96PZ7 3565 aa12.99□□□□□ -0.33
COMMD4-225ENST00000569245 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 UGT2B17O75795 530 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 TNFSF13O75888 250 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 CSTAP01040 98 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 FESP07332 822 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 UBTFL6P0CB48 400 aaPredicted RBP12.98□□□□□ -0.33
COMMD4-225ENST00000569245 SFTPDP35247 375 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 KCNJ10P78508 379 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 CBFBQ13951 182 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 LARS2Q15031 903 aaKnown RBP12.98□□□□□ -0.33
COMMD4-225ENST00000569245 MAPK14Q16539 360 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 IFI44LQ53G44 452 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF311Q5JNZ3 666 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 HBMQ6B0K9 141 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 ESPNLQ6ZVH7 1005 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 VTCN1Q7Z7D3 282 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 SMYD1Q8NB12 490 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 OR2V1Q8NHB1 315 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 LINC01560Q8TB33 94 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 GPR119Q8TDV5 335 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 FAM222BQ8WU58 562 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 SLC47A1Q96FL8 570 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 TPD52L3Q96J77 140 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 SEPHS2Q99611 448 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 QRSL1Q9H0R6 528 aaKnown RBP12.98□□□□□ -0.33
COMMD4-225ENST00000569245 PAQR5Q9NXK6 330 aaPredicted RBP12.98□□□□□ -0.33
COMMD4-225ENST00000569245 GALNT8Q9NY28 637 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 KCNE5Q9UJ90 142 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF232Q9UNY5 417 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 AURKCQ9UQB9 309 aa12.98□□□□□ -0.33
COMMD4-225ENST00000569245 CENPVL1A0A0U1RR11 272 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 GJE1A6NN92 205 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ADAMDEC1O15204 470 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 CXCL13O43927 109 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 TPST1O60507 370 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 AQP8O94778 261 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ATP6V1G2O95670 118 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 LGI1O95970 557 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 NID1P14543 1247 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 IL7RP16871 459 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 PRKCAP17252 672 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 IL11P20809 199 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ELK4P28324 431 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ADH6P28332 368 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 MAGEA2P43356 314 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 CARD18P57730 90 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 FGFBP1Q14512 234 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 QPRTQ15274 297 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 TOMM34Q15785 309 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms