RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 IGHV4-30-2A0A087WSY4 118 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 IGKV3D-15A0A087WSY6 115 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 TMEM120BA0PK00 339 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 SSX4O60224 188 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 RAMP1O60894 148 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 PGRP06401 933 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 TFPIP10646 304 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 COX5AP20674 150 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 IDH2P48735 452 aaKnown RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 CSNK2A1P68400 391 aaPredicted RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 MAPK11Q15759 364 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 HHATQ5VTY9 493 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 DNAJC14Q6Y2X3 702 aaPredicted RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 GRINAQ7Z429 371 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 SPATA19Q7Z5L4 167 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 MTDHQ86UE4 582 aaKnown RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 CCDC103Q8IW40 242 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 ARFGAP2Q8N6H7 521 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 KBTBD8Q8NFY9 601 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 ZNF563Q8TA94 476 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 PNPT1Q8TCS8 783 aaKnown RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 SLC25A43Q8WUT9 341 aaPredicted RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 TRNT1Q96Q11 434 aaKnown RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 OR52E6Q96RD3 313 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 EXOSC3Q9NQT5 275 aaKnown RBP10.46□□□□□ -0.74
GABPB1-206ENST00000543881 SLC6A13Q9NSD5 602 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.747e-11■■■■■ 55.5
GABPB1-206ENST00000543881 CADP27708 2225 aa10.46□□□□□ -0.74
GABPB1-206ENST00000543881 ANK2Q01484 3957 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 A0A096LNT2 108 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 AGAP5A6NIR3 686 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 HDAC3O15379 428 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 PMS2P2O95744 297 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 CD8AP01732 235 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 IGHV3-9P01782 118 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 KITP10721 976 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 CCNA2P20248 432 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 RPS4Y1P22090 263 aaKnown RBP10.45□□□□□ -0.74
GABPB1-206ENST00000543881 BSPH1Q075Z2 132 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 PDK3Q15120 406 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 STK11Q15831 433 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 ZNF621Q6ZSS3 439 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 MAVSQ7Z434 540 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 GALNT5Q7Z7M9 940 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 ZNF433Q8N7K0 673 aaPredicted RBP10.45□□□□□ -0.74
GABPB1-206ENST00000543881 MGARPQ8TDB4 240 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 TRAF4Q9BUZ4 470 aaPredicted RBP10.45□□□□□ -0.74
GABPB1-206ENST00000543881 ALG2Q9H553 416 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 NGBQ9NPG2 151 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 THAP1Q9NVV9 213 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 HDGFL3Q9Y3E1 203 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 ALPK2Q86TB3 2170 aa10.45□□□□□ -0.74
GABPB1-206ENST00000543881 TMEM72A0PK05 275 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 FAM234BA2RU67 622 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 PGM3O95394 542 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 THBS2P35442 1172 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 MVDP53602 400 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 FOXG1P55316 489 aaPredicted RBP10.44□□□□□ -0.74
GABPB1-206ENST00000543881 HPCAP84074 193 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 H3F3AP84243 136 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
GABPB1-206ENST00000543881 PPA1Q15181 289 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 SLC9B1Q4ZJI4 515 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 LRRC74BQ6ZQY2 392 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 ZNF100Q8IYN0 542 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 MAELQ96JY0 434 aaKnown RBP10.44□□□□□ -0.74
GABPB1-206ENST00000543881 TNFRSF13CQ96RJ3 184 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
GABPB1-206ENST00000543881 TRIM2Q9C040 744 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 GRIP2Q9C0E4 1043 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 SHARPINQ9H0F6 387 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 LPAR3Q9UBY5 353 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 OSGIN1Q9UJX0 560 aa10.44□□□□□ -0.74
GABPB1-206ENST00000543881 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
GABPB1-206ENST00000543881 SPIN1Q9Y657 262 aaPredicted RBP10.44□□□□□ -0.74
GABPB1-206ENST00000543881 TMED7-TICAM2A0A0A6YYA0 188 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 ZC3H12DA2A288 527 aaKnown RBP10.43□□□□□ -0.74
GABPB1-206ENST00000543881 TRPC5OSA6NMA1 111 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 SHISA9B4DS77 424 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 IMPDH2P12268 514 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 CLK1P49759 484 aaKnown RBP10.43□□□□□ -0.74
GABPB1-206ENST00000543881 NUDT6P53370 316 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 SLC16A1P53985 500 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 OR2B6P58173 313 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 VLDLRP98155 873 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 NRF1Q16656 503 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 GTDC1Q4AE62 458 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 TIMM23BQ5SRD1 257 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 MRPL2Q5T653 305 aaKnown RBP10.43□□□□□ -0.74
GABPB1-206ENST00000543881 FBXW9Q5XUX1 488 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 CROCCP2Q86T23 111 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 DTX2Q86UW9 622 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 CMIPQ8IY22 773 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 TRIML2Q8N7C3 387 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 OR10H5Q8NGA6 315 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 WDR60Q8WVS4 1066 aa10.43□□□□□ -0.74
GABPB1-206ENST00000543881 MTHFD2LQ9H903 347 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms