RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 OPN4Q9UHM6 478 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 CCL26Q9Y258 94 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 PRELID3BQ9Y3B1 194 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 WDR45Q9Y484 360 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 MDC1Q14676 2089 aaKnown RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TBC1D3KA0A087X1G2 549 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 UBE2QL1A1L167 161 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TBC1D3BA6NDS4 549 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TBC1D3FA6NER0 549 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 IFITM5A6NNB3 132 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 KPNA3O00505 521 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 GPRIN2O60269 458 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SDC3O75056 442 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 GLULP15104 373 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 FUT1P19526 365 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 DPP4P27487 766 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TBC1D3GQ6DHY5 549 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 THSD4Q6ZMP0 1018 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SLC39A11Q8N1S5 342 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 PFN4Q8NHR9 129 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 ASB13Q8WXK3 278 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 S100A16Q96FQ6 103 aaKnown RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 PEX11GQ96HA9 241 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 PAWRQ96IZ0 340 aaKnown RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF681Q96N22 645 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 DERL3Q96Q80 235 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 ARL6Q9H0F7 186 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 NTMQ9P121 344 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 PCDHGA5Q9Y5G8 931 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 KLF2Q9Y5W3 355 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 MPTX1A8MV57 137 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 ACOT7O00154 380 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 ARPC5O15511 151 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 ERI3O43414 337 aaKnown RBP16.24■□□□□ 0.19
RAB40C-205ENST00000539661 SELENOFO60613 162 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 LRG1P02750 347 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 OR2T7P0C7T2 308 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 ANXA7P20073 488 aaKnown RBP16.24■□□□□ 0.19
RAB40C-205ENST00000539661 PTH2RP49190 550 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 PRDX1Q06830 199 aaKnown RBP16.24■□□□□ 0.19
RAB40C-205ENST00000539661 CRMP1Q14194 572 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 ARHGAP11BQ3KRB8 267 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 TP53I3Q53FA7 332 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 MCATQ8IVS2 390 aaKnown RBP16.24■□□□□ 0.19
RAB40C-205ENST00000539661 SLC43A2Q8N370 569 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 DNAAF1Q8NEP3 725 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 OR2T27Q8NH04 317 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 NSMAFQ92636 917 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 SIPA1Q96FS4 1042 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 OR14A2Q96R54 314 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 C20orf141Q9NUB4 165 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF780BQ9Y6R6 833 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 TCRBV16S1A1N1A0A5B0 115 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 POM121CA8CG34 1229 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 C6P13671 934 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 SRMP19623 302 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 NDUFS1P28331 727 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 TSFMP43897 325 aaKnown RBP16.24■□□□□ 0.19
RAB40C-205ENST00000539661 GMFBP60983 142 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 MFSD12Q6NUT3 480 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 WDR88Q6ZMY6 472 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 POMGNT2Q8NAT1 580 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 BPIFA2Q96DR5 249 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 DNTTIP1Q9H147 329 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 SLC25A32Q9H2D1 315 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 KLK11Q9UBX7 282 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 FBXL2Q9UKC9 423 aa16.24■□□□□ 0.19
RAB40C-205ENST00000539661 H3BUI4 141 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 FMO6PO60774 539 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 LYPD3O95274 346 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 HPP00738 406 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 IFNGP01579 166 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PTNP21246 168 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 CD96P40200 585 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PPP2CBP62714 309 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PPP2CAP67775 309 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 SPOUT1Q5T280 376 aaKnown RBP16.23■□□□□ 0.19
RAB40C-205ENST00000539661 C18orf63Q68DL7 685 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 C7orf57Q8NEG2 295 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 OR2L5Q8NG80 312 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 MRPS24Q96EL2 167 aaKnown RBP16.23■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF558Q96NG5 402 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 LRFN5Q96NI6 719 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 MS4A4EQ96PG1 132 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 FOXJ3Q9UPW0 622 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 HEATR5BQ9P2D3 2071 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 IGKV1-8A0A0C4DH67 115 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 TRBV2A0A0J9YWF9 115 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 DNASE2O00115 360 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PCDH8O95206 1070 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 CALCBP10092 127 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 CLUP10909 449 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 P2RX1P51575 399 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 MAT1AQ00266 395 aaKnown RBP16.23■□□□□ 0.19
RAB40C-205ENST00000539661 OR1Q1Q15612 314 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 METRNLQ641Q3 311 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 NHLRC1Q6VVB1 395 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PM20D2Q8IYS1 436 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 LINC01555Q8NAE3 123 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms