RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 CALHM2Q9HA72 323 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 C12orf10Q9HB07 376 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 SERINC1Q9NRX5 453 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-222ENST00000520948 CHRNA9Q9UGM1 479 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 MAGEL2Q9UJ55 1249 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 SH3GLB1Q9Y371 365 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 TMED7Q9Y3B3 224 aa16.27■□□□□ 0.2
VEGFA-222ENST00000520948 KIAA1549Q9HCM3 1950 aa16.27■□□□□ 0.19
VEGFA-222ENST00000520948 TMEM72A0PK05 275 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 CD8B2A6NJW9 211 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 GYG2O15488 501 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 ZNF208O43345 1280 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 TNFRSF1BP20333 461 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 ME2P23368 584 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 CLK1P49759 484 aaKnown RBP16.26■□□□□ 0.19
VEGFA-222ENST00000520948 MS4A2Q01362 244 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 BNIP2Q12982 314 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 MYBPHQ13203 477 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 OR1Q1Q15612 314 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 TMEM176BQ3YBM2 270 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-222ENST00000520948 DNAL1Q4LDG9 190 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 C3orf33Q6P1S2 294 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 TSPYL5Q86VY4 417 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-222ENST00000520948 CARM1Q86X55 608 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 CADM2Q8N3J6 435 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 FAM162AQ96A26 154 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 KLHL15Q96M94 604 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 MCHR1Q99705 422 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 TMEM185BQ9H7F4 350 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 CLCF1Q9UBD9 225 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 SLC9A8Q9Y2E8 581 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 SNX13Q9Y5W8 968 aa16.26■□□□□ 0.19
VEGFA-222ENST00000520948 ZFHX3Q15911 3703 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 A0A0B4J2E0 115 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 A0A1B0GWA3 101 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 A0A1B0GX12 115 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 GJE1A6NN92 205 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 CLCA1A8K7I4 914 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 H0Y3Z8 333 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 ARPC2O15144 300 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 GSC2O15499 205 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 SEC14L5O43304 696 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 LYPD3O95274 346 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 GLI4P10075 376 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 SFTPDP35247 375 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 OR1E2P47887 323 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 TRIM25Q14258 630 aaKnown RBP16.25■□□□□ 0.19
VEGFA-222ENST00000520948 ULK3Q6PHR2 472 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 POMZP3Q6PJE2 187 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 LINC00114Q6XXX2 140 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 B3GNT6Q6ZMB0 384 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 VTCN1Q7Z7D3 282 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 RANBP3LQ86VV4 465 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-222ENST00000520948 LSRQ86X29 649 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-222ENST00000520948 OR2V1Q8NHB1 315 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 VANGL1Q8TAA9 524 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-222ENST00000520948 SLC25A43Q8WUT9 341 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-222ENST00000520948 DNAJA4Q8WW22 397 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-222ENST00000520948 LZICQ8WZA0 190 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 SMPDL3BQ92485 455 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 SLC38A4Q969I6 547 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 TPD52L3Q96J77 140 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 CLPTM1LQ96KA5 538 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 THTPAQ9BU02 230 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 COQ10BQ9H8M1 238 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 TMEM27Q9HBJ8 222 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 ACTR3BQ9P1U1 418 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 RPS6KA6Q9UK32 745 aa16.25■□□□□ 0.19
VEGFA-222ENST00000520948 MBD3L4A6NDZ8 208 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 MBD3L3A6NE82 208 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 MBD3L5A6NJ08 208 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 EIF1AYO14602 144 aaKnown RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 TNFSF11O14788 317 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 NPIPB7O75200 414 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 GMNNO75496 209 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 DNAJC8O75937 253 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 THY1P04216 161 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 CXCR1P25024 350 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 CEACAM8P31997 349 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 TIMP3P35625 211 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 RPS3AP61247 264 aaKnown RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 SYT14P1Q58G82 188 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 ENTPD8Q5MY95 495 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 ZNF613Q6PF04 617 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 TSEN54Q7Z6J9 526 aaKnown RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 ATP6V1C2Q8NEY4 427 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 OR10D3Q8NH80 312 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 MBD3L2Q8NHZ7 208 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 OSTF1Q92882 214 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 ZNF845Q96IR2 970 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 ARL5BQ96KC2 179 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 TRIB1Q96RU8 372 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 CADM1Q9BY67 442 aaKnown RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 MUC13Q9H3R2 512 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 PAQR5Q9NXK6 330 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 KCNN3Q9UGI6 736 aa16.24■□□□□ 0.19
VEGFA-222ENST00000520948 SPIN1Q9Y657 262 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-222ENST00000520948 ACOT8O14734 319 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms