RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 FAM76AQ8TAV0 307 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF675Q8TD23 568 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ACMSDQ8TDX5 336 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ADAMTS15Q8TE58 950 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 C16orf78Q8WTQ4 265 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 DUSP19Q8WTR2 217 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC44A1Q8WWI5 657 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 IPCEF1Q8WWN9 437 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM234Q8WY98 164 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 HSD17B8Q92506 261 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 CPNE4Q96A23 557 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ADIPOR1Q96A54 375 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 MOAP1Q96BY2 351 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 TM4SF18Q96CE8 201 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 R3HDM4Q96D70 268 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 SH3YL1Q96HL8 342 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 GMPPAQ96IJ6 420 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 BTBD9Q96Q07 612 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM237Q96Q45 408 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 NODALQ96S42 347 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF382Q96SR6 550 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 HBEGFQ99075 208 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 RHNO1Q9BSD3 238 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ALG8Q9BVK2 526 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 ACTR6Q9GZN1 396 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 AICDAQ9GZX7 198 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 OPN3Q9H1Y3 402 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 CXXC4Q9H2H0 198 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 UBQLN3Q9H347 655 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 CDC42EP4Q9H3Q1 356 aaKnown RBP3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 LIME1Q9H400 295 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 PPCSQ9HAB8 311 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 SH2D2AQ9NP31 389 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 UBQLN4Q9NRR5 601 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 EXD2Q9NVH0 621 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 NINJ2Q9NZG7 142 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 GRHL1Q9NZI5 618 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 MED11Q9P086 117 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 EMC3Q9P0I2 261 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 KLHL9Q9P2J3 617 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 TBK1Q9UHD2 729 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 GPR52Q9Y2T5 361 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 PCNX1Q96RV3 2341 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 TACC2O95359 2948 aa3.37□□□□□ -1.87
HMGN1P11-201ENST00000508668 INTS1Q8N201 2190 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CACNA1CQ13936 2221 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 OTOGQ6ZRI0 2925 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A087WV62 115 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR2M5A3KFT3 312 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 DUXAA6NLW8 204 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 LINC00473A8K010 186 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 WASHC1A8K0Z3 465 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 A8MT66 165 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 GOLGA8RI6L899 631 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 MGST3O14880 152 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CTIFO43310 598 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RRP9O43818 475 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF354AO60765 605 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RSL1D1O76021 490 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 NXPH3O95157 252 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 UTS2O95399 124 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 AGR2O95994 175 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RPS17P08708 135 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CT62P0C5K7 136 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 MYZAPP0CAP1 466 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 UROSP10746 265 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CPA3P15088 417 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CRYGSP22914 178 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TNFSF4P23510 183 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 GTF2E2P29084 291 aaKnown RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 LCN1P31025 176 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 SFTPDP35247 375 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 LIPAP38571 399 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 EMDP50402 254 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 LHX2P50458 406 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 NUDT6P53370 316 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CSNK2A1P68400 391 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TGFBR3Q03167 851 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM27E3Q08E93 113 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FOXF2Q12947 444 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 DLG1Q12959 904 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRAF3Q13114 568 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 MAD2L1Q13257 205 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CBFBQ13951 182 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 P2RY6Q15077 328 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 RAB35Q15286 201 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRADDQ15628 312 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 NRF1Q16656 503 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM153CQ494X1 144 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATP6AP1LQ52LC2 224 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF628Q5EBL2 1059 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF678Q5SXM1 525 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CPTPQ5TA50 214 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 AGAP6Q5VW22 663 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 NOXRED1Q6NXP6 359 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM180BQ6P0A1 224 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZCCHC12Q6PEW1 402 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 PODNL1Q6PEZ8 512 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLEC2AQ6UVW9 174 aa3.36□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRSS57Q6UWY2 283 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms