RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GBP4Q96PP9 640 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 TSPAN32Q96QS1 320 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 OR5B2Q96R09 309 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 NUDT16L1Q9BRJ7 211 aaKnown RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 MCRIP2Q9BUT9 160 aaKnown RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PACSIN1Q9BY11 444 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 SEMA6AQ9H2E6 1030 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 FBXO6Q9NRD1 293 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 TMEM45AQ9NWC5 275 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 DCAF16Q9NXF7 216 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 NKIRAS2Q9NYR9 191 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 UVRAGQ9P2Y5 699 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 LCMT1Q9UIC8 334 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 LRCH1Q9Y2L9 728 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 A0A0A6YYD5 115 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 IGHV1-69DA0A0B4J2H0 117 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 A0A1B0GVY2 172 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 MYO1GB0I1T2 1018 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 KIF2AO00139 706 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 RRP9O43818 475 aaKnown RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 PRAMEF4O60810 478 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 UBOX5O94941 541 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 UTS2O95399 124 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 CLPTM1O96005 669 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 IGHV1-69P01742 117 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 FRMD6-AS1P0C7T7 363 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 CBR1P16152 277 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 ECI1P42126 302 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 SARNPP82979 210 aaKnown RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF155Q12901 538 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 HABP2Q14520 560 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 OASLQ15646 514 aaKnown RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 PRAMEF9Q5VWM5 478 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 PAQR3Q6TCH7 311 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 BBS12Q6ZW61 710 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 MRPL41Q8IXM3 137 aaKnown RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 PDZD9Q8IXQ8 264 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 RNF175Q8N4F7 328 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 FITM2Q8N6M3 262 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 MLKLQ8NB16 471 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 KIF18AQ8NI77 898 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 BCL2L2Q92843 193 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 THOC1Q96FV9 657 aaKnown RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 CMTM7Q96FZ5 175 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 OR5M11Q96RB7 305 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 TM2D3Q9BRN9 247 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 DCTN5Q9BTE1 182 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 NMUR2Q9GZQ4 415 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 MOV10Q9HCE1 1003 aaKnown RBP5.4□□□□□ -1.54
HDAC3-206ENST00000471968 SERTAD4Q9NUC0 356 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 ZNRD1Q9P1U0 126 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 GPR160Q9UJ42 338 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 COMMD10Q9Y6G5 202 aa5.4□□□□□ -1.54
HDAC3-206ENST00000471968 P2RY10O00398 339 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 PEX14O75381 377 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 H6PDO95479 791 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 FBP1P09467 338 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 CTAGE8P0CG41 777 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 SLC6A2P23975 617 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 CFHR2P36980 270 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 PRIM2P49643 509 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 DIO1P49895 249 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 GPX6P59796 221 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 RPS23P62266 143 aaKnown RBP5.39□□□□□ -1.55
HDAC3-206ENST00000471968 DDX39BQ13838 428 aaKnown RBP5.39□□□□□ -1.55
HDAC3-206ENST00000471968 DECR1Q16698 335 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 HIST2H2ACQ16777 129 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-206ENST00000471968 TMEM155Q4W5P6 130 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 HIST2H2AA3Q6FI13 130 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 FAM180BQ6P0A1 224 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 CCDC121Q6ZUS5 278 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 PIWIL3Q7Z3Z3 882 aaKnown RBP5.39□□□□□ -1.55
HDAC3-206ENST00000471968 DENND6AQ8IWF6 608 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 CTAGE4Q8IX94 777 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 IL17RDQ8NFM7 739 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 OR7G2Q8NG99 324 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 WIPF2Q8TF74 440 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-206ENST00000471968 LHX4Q969G2 390 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 LRRC39Q96DD0 335 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 DDOQ99489 341 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 EGFL8Q99944 293 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 CENPKQ9BS16 269 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 EFCAB11Q9BUY7 163 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 LAT2Q9GZY6 243 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 RANBP3Q9H6Z4 567 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-206ENST00000471968 PARPBPQ9NWS1 579 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 ATP6V1DQ9Y5K8 247 aa5.39□□□□□ -1.55
HDAC3-206ENST00000471968 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 A0A087X0T9 212 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 A0A096LPK6 155 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF503-AS2A6NEH8 195 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 AQP7P3A6NL99 342 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 CEACAM18A8MTB9 384 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 LGALS16A8MUM7 142 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 E7EVH7 732 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 SULT2B1O00204 365 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 BCAS2O75934 225 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms