RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM201Q5SNT2 666 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 GTF2IRD2BQ6EKJ0 949 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF474Q6S9Z5 364 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 MTDHQ86UE4 582 aaKnown RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 GTF2IRD2Q86UP8 949 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 SLC30A8Q8IWU4 369 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 SLC43A2Q8N370 569 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 ZHX1-C8orf76Q96EF9 292 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 TACO1Q9BSH4 297 aaKnown RBP11.5□□□□□ -0.57
COL5A1-206ENST00000465877 ADAM19Q9H013 955 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 C12orf49Q9H741 205 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 BCO1Q9HAY6 547 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 MCCC2Q9HCC0 563 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 GP6Q9HCN6 339 aa11.5□□□□□ -0.57
COL5A1-206ENST00000465877 OTOGQ6ZRI0 2925 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 SNX3O60493 162 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 TPST1O60507 370 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 CYTIPO60759 359 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 PRKD3O94806 890 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 MFN2O95140 757 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 COX4I1P13073 169 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 POU2F1P14859 743 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 CXCR1P25024 350 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 HTR2AP28223 471 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 IDUAP35475 653 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 CD79BP40259 229 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 KCNJ5P48544 419 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 GZMMP51124 257 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 MAP2K6P52564 334 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 EXOC3L2Q2M3D2 409 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 VMACQ2NL98 169 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
COL5A1-206ENST00000465877 CPLX4Q7Z7G2 160 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
COL5A1-206ENST00000465877 TMEM200AQ86VY9 491 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 CALHM3Q86XJ0 350 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 TREML1Q86YW5 311 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 RP9Q8TA86 221 aaKnown RBP11.49□□□□□ -0.57
COL5A1-206ENST00000465877 LURAP1Q96LR2 239 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 SH3GL1Q99961 368 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 PIF1Q9H611 641 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 GID8Q9NWU2 228 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 KLHL28Q9NXS3 571 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 TMEM181Q9P2C4 612 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 ING1Q9UK53 422 aaPredicted RBP11.49□□□□□ -0.57
COL5A1-206ENST00000465877 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 PRDM4Q9UKN5 801 aa11.49□□□□□ -0.57
COL5A1-206ENST00000465877 SH3D21A4FU49 640 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 FAM220BPB1ANY3 271 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 GCM2O75603 506 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-206ENST00000465877 IMPDH2P12268 514 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 PCYT1AP49585 367 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 OR2B6P58173 313 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 FAM27E3Q08E93 113 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 RASGEF1BQ0VAM2 473 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 BNIP2Q12982 314 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 C6orf89Q6UWU4 347 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 TFAP2EQ6VUC0 442 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 ARPINQ7Z6K5 226 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 ATG4DQ86TL0 474 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-206ENST00000465877 STK32CQ86UX6 486 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 LSMEM1Q8N8F7 131 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF610Q8N9Z0 462 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 LINC01560Q8TB33 94 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 PIGXQ8TBF5 258 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 FAM222BQ8WU58 562 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 TAMM41Q96BW9 452 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF300Q96RE9 604 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-206ENST00000465877 ECSITQ9BQ95 431 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 MYLK2Q9H1R3 596 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 ELOVL5Q9NYP7 299 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 RPS6KB2Q9UBS0 482 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 USP22Q9UPT9 525 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 TRAPPC4Q9Y296 219 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 TESMINQ9Y4I5 508 aa11.48□□□□□ -0.57
COL5A1-206ENST00000465877 A0A1B0GWA3 101 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 GMNCA6NCL1 334 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 A6NNC1 897 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF716A6NP11 495 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF814B7Z6K7 855 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 M0R3H8 397 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 YES1P07947 543 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 CD247P20963 164 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 UGT2B10P36537 528 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 NUDT2P50583 147 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 CRYBA2P53672 197 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 KRTAP10-9P60411 292 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 SLC35A1P78382 337 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 ALG10BQ5I7T1 473 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 NUFIP2Q7Z417 695 aaKnown RBP11.47□□□□□ -0.57
COL5A1-206ENST00000465877 RANBP3LQ86VV4 465 aaPredicted RBP11.47□□□□□ -0.57
COL5A1-206ENST00000465877 GPR32P1Q8NGA4 272 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 OR52E4Q8NGH9 312 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 ARHGDIGQ99819 225 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms