RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RFX3P48380 749 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 XKP51811 444 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 IRF9Q00978 393 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DHODHQ02127 395 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PAX5Q02548 391 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 AESQ08117 197 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ECH1Q13011 328 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TNK1Q13470 666 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CTTNQ14247 550 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 GPNMBQ14956 572 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR8G1Q15617 311 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 EXT1Q16394 746 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 RPE65Q16518 533 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MAN2A1Q16706 1144 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ATP6V1FQ16864 119 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MICAQ29983 383 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 QRICH1Q2TAL8 776 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 VPS26BQ4G0F5 336 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC9C1Q4G0N8 1177 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CCDC157Q569K6 752 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CTSL3PQ5NE16 218 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSTD2Q5T7W7 516 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 HECTD2Q5U5R9 776 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 AGAP6Q5VW22 663 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 H3F3CQ6NXT2 135 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DENND1BQ6P3S1 775 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC27A1Q6PCB7 646 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SCIMPQ6UWF3 145 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAD9BQ6WBX8 426 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DPY19L3Q6ZPD9 716 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LRRC55Q6ZSA7 311 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LRRC28Q86X40 367 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CACUL1Q86Y37 369 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 GLB1L2Q8IW92 636 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 Q8N402 240 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DNAJC22Q8N4W6 341 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PACRGLQ8N7B6 248 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 C4orf32Q8N8J7 132 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF383Q8NA42 475 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR9A4Q8NGU2 314 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PIGXQ8TBF5 258 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 UBTD2Q8WUN7 234 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 S100ZQ8WXG8 99 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NRGNQ92686 78 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 GHSRQ92847 366 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 OSTF1Q92882 214 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DAZLQ92904 295 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ESAMQ96AP7 390 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 BIRC7Q96CA5 298 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LRRC46Q96FV0 321 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NARS2Q96I59 477 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CELF6Q96J87 481 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 POM121L2Q96KW2 1035 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LRR1Q96L50 414 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 WDFY2Q96P53 400 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 AGAP4Q96P64 663 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PAFAH2Q99487 392 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSNAXQ99598 290 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PHB2Q99623 299 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NAPGQ99747 312 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 RSG1Q9BU20 258 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF426Q9BUY5 554 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ALG8Q9BVK2 526 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 FSD1LQ9BXM9 530 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 HDHD5Q9BXW7 423 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 UGT2B28Q9BY64 529 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 HAPLN2Q9GZV7 340 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ARV1Q9H2C2 271 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TOR3AQ9H497 397 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PCIF1Q9H4Z3 704 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PPP1R3EQ9H7J1 279 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NIPAL2Q9H841 368 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MTHFD2LQ9H903 347 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 WDR76Q9H967 626 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACTR8Q9H981 624 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC28A3Q9HAS3 691 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ROPN1Q9HAT0 212 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 C6orf50Q9HD87 102 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MYOZ2Q9NPC6 264 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADARB2Q9NS39 739 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC2A8Q9NY64 477 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF224Q9NZL3 707 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR6C3Q9NZP0 311 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC17A6Q9P2U8 582 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 METTL1Q9UBP6 276 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LRWD1Q9UFC0 647 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NENFQ9UMX5 172 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSSC4Q9Y5U2 329 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SAR1BQ9Y6B6 198 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 COL14A1Q05707 1796 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PIK3C2AO00443 1686 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 TRAV26-1A0A087WT03 109 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 NPIPA5A0A0B4J1W7 369 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 A0A1W2PQM1 296 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 GAGE10A6NGK3 116 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 GJE1A6NN92 205 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
HMGB3P9-201ENST00000441799 CLDN25C9JDP6 229 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms