RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 AURKBQ96GD4 344 aaPredicted RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 BDH2Q9BUT1 245 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 CXorf56Q9H5V9 222 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 SDR39U1Q9NRG7 319 aaPredicted RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 CALML5Q9NZT1 146 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 P2RX2Q9UBL9 471 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 TRAPPC4Q9Y296 219 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 RNF115Q9Y4L5 304 aa8.22□□□□□ -1.09
NUP50-206ENST00000422489 ANKHD1Q8IWZ3 2542 aaKnown RBP8.22□□□□□ -1.09
NUP50-206ENST00000422489 A0A0G2JPF8 293 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZC3H12DA2A288 527 aaKnown RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 TRIM64A6NGJ6 449 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 TRIM64BA6NI03 449 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZNF716A6NP11 495 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 HNRNPCL2B2RXH8 293 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 C5orf58C9J3I9 102 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 KLF11O14901 512 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 POLR3GO15318 223 aaPredicted RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZNF208O43345 1280 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 HNRNPCL1O60812 293 aaKnown RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 RAMP1O60894 148 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZCCHC18P0CG32 403 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 IDH3AP50213 366 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZNF83P51522 516 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 CRISP3P54108 245 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ATP5J2P56134 94 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 RPS4XP62701 263 aaKnown RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 PLAURQ03405 335 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 LTBQ06643 244 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 BSPH1Q075Z2 132 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 CEACAM7Q14002 265 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 LARS2Q15031 903 aaKnown RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 PDK3Q15120 406 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 PPA1Q15181 289 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 MAPK11Q15759 364 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 LIN52Q52LA3 116 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZNF311Q5JNZ3 666 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 C9orf135Q5VTT2 229 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZNF836Q6ZNA1 936 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 ZNF440Q8IYI8 595 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 CIARTQ8N365 385 aaPredicted RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 CLIP4Q8N3C7 705 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 SMAP2Q8WU79 429 aaPredicted RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 SLC38A5Q8WUX1 472 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 GTPBP3Q969Y2 492 aaKnown RBP8.21□□□□□ -1.1
NUP50-206ENST00000422489 POM121Q96HA1 1249 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 TMEM19Q96HH6 336 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 TMEM204Q9BSN7 226 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 C1QTNF6Q9BXI9 259 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 POTEKPQ9BYX7 375 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 PARPBPQ9NWS1 579 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 UPB1Q9UBR1 384 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 PCDHB14Q9Y5E9 798 aa8.21□□□□□ -1.1
NUP50-206ENST00000422489 IGKV3D-15A0A087WSY6 115 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 A0A1W2PP18 115 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 A0A1W2PR80 420 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 CDHR4A6H8M9 788 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 CLIC1O00299 241 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 DNPH1O43598 174 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 EIF1BO60739 113 aaKnown RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 RAD51DO75771 328 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 CNOT4O95628 575 aaKnown RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 LY6G6DO95868 133 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 PTNP21246 168 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 NTF4P34130 210 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 IDUAP35475 653 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 MVDP53602 400 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 AQP5P55064 265 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 HOXC5Q00444 222 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 BNIP2Q12982 314 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 OR7A5Q15622 319 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 TIMM23BQ5SRD1 257 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 OTUD3Q5T2D3 398 aaPredicted RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 TMEM225Q6GV28 225 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 ABLIM2Q6H8Q1 611 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 WBP2NLQ6ICG8 309 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 ADAM5Q6NVV9 412 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 PRSS57Q6UWY2 283 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 CASP12Q6UXS9 341 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 MSANTD1Q6ZTZ1 278 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 ZNF433Q8N7K0 673 aaPredicted RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 GOLGA6L1Q8N7Z2 621 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 TMEM99Q8N816 258 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 KBTBD8Q8NFY9 601 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 OR52E4Q8NGH9 312 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 OR52N5Q8NH56 324 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 GTF2H4Q92759 462 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 FBXW5Q969U6 566 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 TRMT61AQ96FX7 289 aaKnown RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 ATP6V1G3Q96LB4 118 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 TAPBPLQ9BX59 468 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 GSX2Q9BZM3 304 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 ADAM19Q9H013 955 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 PAIP1Q9H074 479 aaKnown RBP8.2□□□□□ -1.1
NUP50-206ENST00000422489 ARMC7Q9H6L4 198 aa8.2□□□□□ -1.1
NUP50-206ENST00000422489 SLCO1B3Q9NPD5 702 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms