RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 APOBEC3BQ9UH17 382 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 TGM5O43548 720 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 EGFP01133 1207 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 OR13C7P0DN81 318 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 PLCXD3Q63HM9 321 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 FAM57BQ71RH2 274 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 OR4K15Q8NH41 348 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 GHSRQ92847 366 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 RLIMQ9NVW2 624 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 ZNF281Q9Y2X9 895 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 NUP188Q5SRE5 1749 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 LGALS8O00214 317 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 POLR2HP52434 150 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 GPR18Q14330 331 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.25□□□□□ -0.614e-8■■■■□ 23.5
UBR4-205ENST00000417040 TMUB2Q71RG4 321 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 PDLIM7Q9NR12 457 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 PURGQ9UJV8 347 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 ADAM18Q9Y3Q7 739 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 OTX2P32243 289 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 ADRA1AP35348 466 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 SLC1A3P43003 542 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RNF151Q2KHN1 245 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 TAS1R1Q7RTX1 841 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 OR52E1Q8NGJ3 308 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 ABHD4Q8TB40 342 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 TMEM255BQ8WV15 326 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 SPTSSAQ969W0 71 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 MBOAT4Q96T53 435 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 HCFC1R1Q9NWW0 138 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 A8MXE2 369 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 UGDHO60701 494 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 SCAF4O95104 1147 aaKnown RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 MGST1P10620 155 aaKnown RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 CRABP1P29762 137 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 MMP12P39900 470 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RAP2BP61225 183 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 CHRNEQ04844 493 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RIPPLY1Q0D2K3 151 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 OR56B4Q8NH76 319 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 ZFYVE21Q9BQ24 234 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 CPNE7Q9UBL6 633 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 C1orf105O95561 183 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 PVRP15151 417 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 HCCSP53701 268 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RBMS2Q15434 407 aaKnown RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 C9orf135Q5VTT2 229 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 FAM219BQ5XKK7 198 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 OR10K2Q6IF99 312 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 LCTLQ6UWM7 567 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RFLNAQ6ZTI6 216 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 MOB3CQ70IA8 216 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 TMEM151BQ8IW70 566 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 CNTN4Q8IWV2 1026 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 ADAMTS14Q8WXS8 1223 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 HHLA1C9JL84 531 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 ONECUT3O60422 494 aaPredicted RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 SPNP16150 400 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 LTB4RQ15722 352 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 LACC1Q8IV20 430 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 PGAP3Q96FM1 320 aaPredicted RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 TCEAL7Q9BRU2 100 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 WWTR1Q9GZV5 400 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 DZANK1Q9NVP4 752 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RBFOX1Q9NWB1 397 aaKnown RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 ABRACLQ9P1F3 81 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 A0A0D9SG52 128 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 TMEM269A0A1B0GVZ9 245 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 OR2A25A4D2G3 310 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 HOXB9P17482 250 aaPredicted RBP11.24□□□□□ -0.61
UBR4-205ENST00000417040 EMP2P54851 167 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RFPL4BQ6ZWI9 263 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 CHCHD4Q8N4Q1 142 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 OR5D18Q8NGL1 313 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 FIBINQ8TAL6 211 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 RAB7BQ96AH8 199 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 SORCS2Q96PQ0 1159 aa11.24□□□□□ -0.61
UBR4-205ENST00000417040 IDUAP35475 653 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 MRPL2Q5T653 305 aaKnown RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 TMEM217Q8N7C4 229 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SLC38A5Q8WUX1 472 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 ZNF775Q96BV0 537 aaPredicted RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 SLC17A9Q9BYT1 436 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 AMBRA1Q9C0C7 1298 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 TMEM231Q9H6L2 316 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SLC2A4RGQ9NR83 387 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 TMEM72A0PK05 275 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 IGFBP1P08833 259 aaPredicted RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 ATXN1LP0C7T5 689 aaKnown RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 ZNF28P17035 718 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 NUDT1P36639 197 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 936.6 ms