RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 OR52N2Q8NGI0 321 aa13□□□□□ -0.33
RERE-204ENST00000400908 ZNF597Q96LX8 424 aa13□□□□□ -0.33
RERE-204ENST00000400908 SEMA4CQ9C0C4 833 aa13□□□□□ -0.33
RERE-204ENST00000400908 OR14J1Q9UGF5 321 aa13□□□□□ -0.33
RERE-204ENST00000400908 POLHQ9Y253 713 aa13□□□□□ -0.33
RERE-204ENST00000400908 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
RERE-204ENST00000400908 MYH8P13535 1937 aa13□□□□□ -0.33
RERE-204ENST00000400908 TO15178 435 aa13□□□□□ -0.33
RERE-204ENST00000400908 PPP2CAP67775 309 aa13□□□□□ -0.33
RERE-204ENST00000400908 KLHDC1Q8N7A1 406 aa13□□□□□ -0.33
RERE-204ENST00000400908 SAP130Q9H0E3 1048 aa13□□□□□ -0.33
RERE-204ENST00000400908 FAM234AQ9H0X4 552 aa13□□□□□ -0.33
RERE-204ENST00000400908 CREBZFQ9NS37 354 aa13□□□□□ -0.33
RERE-204ENST00000400908 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
RERE-204ENST00000400908 YIPF1Q9Y548 306 aa13□□□□□ -0.33
RERE-204ENST00000400908 CEPT1Q9Y6K0 416 aa13□□□□□ -0.33
RERE-204ENST00000400908 SUSD5O60279 629 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 RPS5P46782 204 aaKnown RBP12.99□□□□□ -0.33
RERE-204ENST00000400908 HSF1Q00613 529 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 SQSTM1Q13501 440 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 MOB3CQ70IA8 216 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 ZFP90Q8TF47 636 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 MVB12BQ9H7P6 319 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 RANGRFQ9HD47 186 aaPredicted RBP12.99□□□□□ -0.33
RERE-204ENST00000400908 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.99□□□□□ -0.332e-7■■■■■ 31.9
RERE-204ENST00000400908 MRPL22Q9NWU5 206 aaKnown RBP12.99□□□□□ -0.33
RERE-204ENST00000400908 USP36Q9P275 1121 aaKnown RBP12.99□□□□□ -0.33
RERE-204ENST00000400908 CDK4P11802 303 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 BPIFCQ8NFQ6 507 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 F2RL3Q96RI0 385 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 RAB18Q9NP72 206 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CLCF1Q9UBD9 225 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 B4GALT6Q9UBX8 382 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 INTS6Q9UL03 887 aaKnown RBP12.99□□□□□ -0.33
RERE-204ENST00000400908 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 ANKUB1A6NFN9 424 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 GPR176Q14439 515 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 PTPRCAPQ14761 206 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CTSL3PQ5NE16 218 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 ADAM5Q6NVV9 412 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 BLOC1S3Q6QNY0 202 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 OR6V1Q8N148 313 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 OR1S2Q8NGQ3 325 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 OLAHQ9NV23 265 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CHD4Q14839 1912 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CDHR4A6H8M9 788 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 FAM163BP0C2L3 166 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 PSMB10P40306 273 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 SLC6A8P48029 635 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 EPHA4P54764 986 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 CEACAM7Q14002 265 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 FAM180BQ6P0A1 224 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 PIWIL3Q7Z3Z3 882 aaKnown RBP12.99□□□□□ -0.33
RERE-204ENST00000400908 KDM1BQ8NB78 822 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 PCDHGA1Q9Y5H4 931 aa12.99□□□□□ -0.33
RERE-204ENST00000400908 TAF1P21675 1872 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 IGKV6D-21A0A0A0MT36 114 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 ICMTO60725 284 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 ELK1P19419 428 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 AADACP22760 399 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 EMP3P54852 163 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 ERVFC1P60507 584 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 RANP62826 216 aaKnown RBP12.98□□□□□ -0.33
RERE-204ENST00000400908 CDK5R2Q13319 367 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 TCEAL1Q15170 157 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 DEFB119Q8N690 84 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 CYB561A3Q8NBI2 242 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 M1APQ8TC57 530 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 OBP2BQ9NPH6 170 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 KPTNQ9Y664 436 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 CD1DP15813 335 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 XCR1P46094 333 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 LCN6P62502 163 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 RAB40BQ12829 278 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
RERE-204ENST00000400908 TMEM201Q5SNT2 666 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 MARC2Q969Z3 335 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 SLC41A2Q96JW4 573 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 C10orf90Q96M02 699 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 PEBP4Q96S96 227 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 HERPUD2Q9BSE4 406 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 SRRQ9GZT4 340 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 DYNLRB1Q9NP97 96 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 UGT2A1Q9Y4X1 527 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 SLC22A7Q9Y694 548 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 OR6C76A6NM76 312 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 PIRO00625 290 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 CLDN8P56748 225 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 PAFAH1B3Q15102 231 aaKnown RBP12.98□□□□□ -0.33
RERE-204ENST00000400908 BCL7AQ4VC05 210 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 KCTD11Q693B1 232 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 CTU1Q7Z7A3 348 aaKnown RBP12.98□□□□□ -0.33
RERE-204ENST00000400908 DCAF4L2Q8NA75 395 aa12.98□□□□□ -0.33
RERE-204ENST00000400908 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms