RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ELOVL5Q9NYP7 299 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 EMC3Q9P0I2 261 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 TRAPPC4Q9Y296 219 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 ARL2BPQ9Y2Y0 163 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 CHST2Q9Y4C5 530 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 ANKHD1Q8IWZ3 2542 aaKnown RBP17.14■□□□□ 0.33
SYNE4-202ENST00000340477 ELOA3DA6NLF2 546 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-202ENST00000340477 NDUFAB1O14561 156 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 EIF1BO60739 113 aaKnown RBP17.13■□□□□ 0.33
SYNE4-202ENST00000340477 MFN2O95140 757 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 IFNA14P01570 189 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 POU2F1P14859 743 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 IDUAP35475 653 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 NUDT2P50583 147 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 SLC35A1P78382 337 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 ELOA3BQ3SY89 546 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 SMYD1Q8NB12 490 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 ELOA3Q8NG57 546 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 PIGXQ8TBF5 258 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 HOPXQ9BPY8 73 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-202ENST00000340477 NAA11Q9BSU3 229 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-202ENST00000340477 TAPBPLQ9BX59 468 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 TMEM27Q9HBJ8 222 aa17.13■□□□□ 0.33
SYNE4-202ENST00000340477 ADGRG4Q8IZF6 3080 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 CACNA1DQ01668 2161 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 A8MVM7 634 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 FAM220BPB1ANY3 271 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 M0QX08 132 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 SMAD9O15198 467 aaKnown RBP17.12■□□□□ 0.33
SYNE4-202ENST00000340477 CYTIPO60759 359 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 DCTN3O75935 186 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 OPN1SWP03999 348 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 GPIP06744 558 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 C8BP07358 591 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 YES1P07947 543 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 PRDX6P30041 224 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 CD79BP40259 229 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 HOXC5Q00444 222 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 TLE4Q04727 773 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 DMTNQ08495 405 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 OR2T12Q8NG77 320 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 RNF217Q8TC41 542 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 FAM222BQ8WU58 562 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 DNAJA4Q8WW22 397 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-202ENST00000340477 C3orf49Q96BT1 292 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 ARL5BQ96KC2 179 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 POTEKPQ9BYX7 375 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 MYLK2Q9H1R3 596 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 C12orf49Q9H741 205 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 C12orf10Q9HB07 376 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 NDRG3Q9UGV2 375 aa17.12■□□□□ 0.33
SYNE4-202ENST00000340477 TPST1O60507 370 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 PNMTP11086 282 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 GTF2E2P29084 291 aaKnown RBP17.11■□□□□ 0.33
SYNE4-202ENST00000340477 PCYT1AP49585 367 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 VEZF1Q14119 521 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 EXOC3L2Q2M3D2 409 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 BEND4Q6ZU67 534 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 CALHM3Q86XJ0 350 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 TREML1Q86YW5 311 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 TUSC5Q8IXB3 177 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 ZNF610Q8N9Z0 462 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 DNAJA3Q96EY1 480 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 LRRC37BQ96QE4 947 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 PLSCR4Q9NRQ2 329 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 SLC9A8Q9Y2E8 581 aa17.11■□□□□ 0.33
SYNE4-202ENST00000340477 MPDZO75970 2070 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 GPR171O14626 319 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 AHSA1O95433 338 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 CGAP01215 116 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 GZMMP51124 257 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 SNTB1Q13884 538 aaKnown RBP17.1■□□□□ 0.33
SYNE4-202ENST00000340477 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 ALG10BQ5I7T1 473 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 C1orf140Q5VVS0 124 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 FAM91A1Q658Y4 838 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 ABLIM2Q6H8Q1 611 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 ULK3Q6PHR2 472 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 C5orf46Q6UWT4 87 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 HACD2Q6Y1H2 254 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 CCDC80Q76M96 950 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 ATG4DQ86TL0 474 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-202ENST00000340477 TMEM200AQ86VY9 491 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 LSMEM1Q8N8F7 131 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 STK35Q8TDR2 534 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 PROX1Q92786 737 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 SLC47A1Q96FL8 570 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 PSD2Q9BQI7 771 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 BCO1Q9HAY6 547 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 CRIM1Q9NZV1 1036 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 BAG5Q9UL15 447 aa17.1■□□□□ 0.33
SYNE4-202ENST00000340477 A0A1B0GWA3 101 aa17.09■□□□□ 0.33
SYNE4-202ENST00000340477 ELOVL7A1L3X0 281 aa17.09■□□□□ 0.33
SYNE4-202ENST00000340477 ZC3H12DA2A288 527 aaKnown RBP17.09■□□□□ 0.33
SYNE4-202ENST00000340477 ZNF724A8MTY0 619 aa17.09■□□□□ 0.33
SYNE4-202ENST00000340477 GSTA4O15217 222 aa17.09■□□□□ 0.33
SYNE4-202ENST00000340477 FMO6PO60774 539 aa17.09■□□□□ 0.33
SYNE4-202ENST00000340477 LGI1O95970 557 aa17.09■□□□□ 0.33
SYNE4-202ENST00000340477 PRF1P14222 555 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms