RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 CDCA3Q99618 268 aaPredicted RBP11.58□□□□□ -0.56
UBXN4-201ENST00000272638 FOXQ1Q9C009 403 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 COMMD4Q9H0A8 199 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 C14orf105Q9NVL8 296 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 ASB6Q9NWX5 421 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 FNDC1Q4ZHG4 1894 aaPredicted RBP11.58□□□□□ -0.56
UBXN4-201ENST00000272638 CXorf51AA0A1B0GTR3 108 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 OR5K3A6NET4 321 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 CSF3P09919 207 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 ELK1P19419 428 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 GPR143P51810 404 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 PSMD4P55036 377 aaKnown RBP11.58□□□□□ -0.56
UBXN4-201ENST00000272638 KRT77Q7Z794 578 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 TMED4Q7Z7H5 227 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 GPALPP1Q8IXQ4 340 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 OR10H5Q8NGA6 315 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 ABHD4Q8TB40 342 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 BAHD1Q8TBE0 780 aaPredicted RBP11.58□□□□□ -0.56
UBXN4-201ENST00000272638 DPAGT1Q9H3H5 408 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 MOV10Q9HCE1 1003 aaKnown RBP11.58□□□□□ -0.56
UBXN4-201ENST00000272638 KLRF1Q9NZS2 232 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 KCND3Q9UK17 655 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 SCML1Q9UN30 329 aa11.58□□□□□ -0.56
UBXN4-201ENST00000272638 GP1BBP13224 206 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 GABRB1P18505 474 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 MAP3K8P41279 467 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CARD17Q5XLA6 110 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF770Q6IQ21 691 aaPredicted RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ULK3Q6PHR2 472 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 PIAS4Q8N2W9 510 aaPredicted RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 OR5J2Q8NH18 312 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 SP7Q8TDD2 431 aaPredicted RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF576Q9H609 170 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 INIPQ9NRY2 104 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 IDSB3KWA1 339 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 LINC00271P0C7V0 271 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 PIPP12273 146 aaPredicted RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 APEHP13798 732 aaKnown RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF823P16415 610 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CD38P28907 300 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ARRB1P49407 418 aaPredicted RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 MAB21L1Q13394 359 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF425Q6IV72 752 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 KIRREL2Q6UWL6 708 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 DPY19L4Q7Z388 723 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ATCAYQ86WG3 371 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 IRF2BPLQ9H1B7 796 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 PRODH2Q9UF12 536 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF879B4DU55 563 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ITGA10O75578 1167 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 SERPINA3P01011 423 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 SBK2P0C263 348 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 PTHLHP12272 177 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CCKBRP32239 447 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 DNASE1L1P49184 302 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 RAB38P57729 211 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CDK5Q00535 292 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 SNTA1Q13424 505 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 LPAL2Q16609 132 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 FCRL6Q6DN72 434 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CA13Q8N1Q1 262 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 LSM14AQ8ND56 463 aaKnown RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 DNAAF1Q8NEP3 725 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 C16orf52Q8NHV5 167 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ACOXLQ9NUZ1 547 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF69Q9UC07 566 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 SVILO95425 2214 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CPEP16870 476 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CCR6P51684 374 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 OR1D5P58170 312 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ZIC1Q15915 447 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 CCDC190Q86UF4 302 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 DCLRE1CQ96SD1 692 aaKnown RBP11.57□□□□□ -0.56
UBXN4-201ENST00000272638 TAS2R10Q9NYW0 307 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 ALG5Q9Y673 324 aa11.57□□□□□ -0.56
UBXN4-201ENST00000272638 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 IMPA2O14732 288 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 S100A1P23297 94 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 HTR2AP28223 471 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 FAM205BPQ63HN1 556 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 KIAA0895LQ68EN5 471 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 NIPAL3Q6P499 406 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 ZDHHC12Q96GR4 267 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 GAS2L1Q99501 681 aaPredicted RBP11.56□□□□□ -0.56
UBXN4-201ENST00000272638 ARHGAP9Q9BRR9 750 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 SYT4Q9H2B2 425 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 SLC2A4RGQ9NR83 387 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 SERTAD3Q9UJW9 196 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 TMEM129A0AVI4 362 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 AK1P00568 194 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 PITPNBP48739 271 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF81P51508 661 aa11.56□□□□□ -0.56
UBXN4-201ENST00000272638 MRPS21P82921 87 aaKnown RBP11.56□□□□□ -0.56
UBXN4-201ENST00000272638 OC90Q02509 493 aaPredicted RBP11.56□□□□□ -0.56
UBXN4-201ENST00000272638 SLC25A35Q3KQZ1 300 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms