RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ETV4P43268 484 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 OR1D5P58170 312 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 PODNL1Q6PEZ8 512 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 ESX1Q8N693 406 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 STT3BQ8TCJ2 826 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 HAVCR2Q8TDQ0 301 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 SGK3Q96BR1 496 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 OR52D1Q9H346 318 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 RPS10P5Q9NQ39 176 aa12.36□□□□□ -0.43
COL1A1-201ENST00000225964 HPGDSO60760 199 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 HLA-DMAP28067 261 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 AHRP35869 848 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 HLCSP50747 726 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 EPHA5P54756 1037 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 YPEL5P62699 121 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 TNFRSF17Q02223 184 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ARL16Q0P5N6 197 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 MEF2DQ14814 521 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ENDOVQ8N8Q3 282 aaKnown RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ARL11Q969Q4 196 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF578Q96N58 590 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 SGPP1Q9BX95 441 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 CDCP1Q9H5V8 836 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 HHLA2Q9UM44 414 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 YKT6O15498 198 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF264O43296 627 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 LYRM1O43325 122 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ARAFP10398 606 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 SSTR4P31391 388 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 MRPL2Q5T653 305 aaKnown RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 CST9LP1Q5W188 147 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 RANBP10Q6VN20 620 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ASB17Q8WXJ9 295 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 J3KTA2 159 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ARPC1BO15143 372 aaKnown RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 GPR75O95800 540 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 MT-ND4P03905 459 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 HOXD9P28356 352 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 TM4SF4P48230 202 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ERVFC1P60507 584 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 MSMO1Q15800 293 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 GOLM1Q8NBJ4 401 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 B3GNT7Q8NFL0 401 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ADAMTS16Q8TE57 1224 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 PRRT1Q99946 306 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 IL13RA1P78552 427 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 TRUB1Q8WWH5 349 aaKnown RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 MRPS2Q9Y399 296 aaKnown RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF891A8MT65 544 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 PIP5K1CO60331 668 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 TP53P04637 393 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 MYOGP15173 224 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 NKX6-1P78426 367 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-201ENST00000225964 LRRC26Q2I0M4 334 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 NPSR1Q6W5P4 371 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 GAREM2Q75VX8 874 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 NMNAT2Q9BZQ4 307 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
COL1A1-201ENST00000225964 ZCWPW2A0A1B0GU75 182 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 H7C1C5 153 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-201ENST00000225964 TPOP07202 933 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 DEFA4P12838 97 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 HLA-FP30511 346 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 LCN6P62502 163 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SLC35A1P78382 337 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 LTBQ06643 244 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ANKRD13BQ86YJ7 626 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SIMC1Q8NDZ2 872 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 OR6F1Q8NGZ6 308 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 C17orf50Q8WW18 174 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF300Q96RE9 604 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-201ENST00000225964 TXN2Q99757 166 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1B0GTW7 788 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SURF4O15260 269 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 MPEG1Q2M385 716 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 PIANPQ8IYJ0 282 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF480Q8WV37 535 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 NT5C3BQ969T7 300 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 WWTR1Q9GZV5 400 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SPHK1Q9NYA1 384 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 MICAL3Q7RTP6 2002 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1W2PPH5 198 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 GPR39O43194 453 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 HOXB5P09067 269 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 MTCP1P56278 107 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 CLDN6P56747 220 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 PDLIM3Q53GG5 364 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-201ENST00000225964 C3orf58Q8NDZ4 430 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 ZFPM2Q8WW38 1151 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms