RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SPATA16Q9BXB7 569 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 C1orf21Q9H246 121 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 WDR76Q9H967 626 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 NECAP2Q9NVZ3 263 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 GSTK1Q9Y2Q3 226 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 MAD1L1Q9Y6D9 718 aa2.91□□□□□ -1.94
SCAMP1-205ENST00000614488 KRT87PA6NCN2 255 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 LGI1O95970 557 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 CA1P00915 261 aaPredicted RBP2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 PCCBP05166 539 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 H2BFMP0C1H6 154 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 GAP43P17677 238 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 ACADVLP49748 655 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 BIDP55957 195 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 SELENOTP62341 195 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 RIPK1Q13546 671 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 SHHQ15465 462 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 NRF1Q16656 503 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 C12orf60Q5U649 245 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 C6orf89Q6UWU4 347 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 DHRSXQ8N5I4 330 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 KIR3DL3Q8N743 410 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 OR10A7Q8NGE5 316 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 BRSK1Q8TDC3 778 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 C12orf66Q96MD2 445 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 NAP1L5Q96NT1 182 aaPredicted RBP2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 OR11A1Q9GZK7 315 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 EML4Q9HC35 981 aaKnown RBP2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 ERVW-1Q9UQF0 538 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 CHMP2BQ9UQN3 213 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 ATP10DQ9P241 1426 aa2.9□□□□□ -1.95
SCAMP1-205ENST00000614488 IGLV4-60A0A075B6I1 120 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 A0A096LNJ9 63 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 OR10H3O60404 316 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 SLC25A27O95847 323 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 HTR2AP28223 471 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 KLK7P49862 253 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 KPNA2P52292 529 aaKnown RBP2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 AP3M2P53677 418 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 ZNF763Q0D2J5 394 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 PTGES3Q15185 160 aaKnown RBP2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 OR5L2Q8NGL0 311 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 FOPNLQ96NB1 174 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 TSG101Q99816 390 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 RHBGQ9H310 441 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 NTN4Q9HB63 628 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 TBK1Q9UHD2 729 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 HOOK1Q9UJC3 728 aaKnown RBP2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 V9GY05 133 aa2.89□□□□□ -1.95
SCAMP1-205ENST00000614488 IGHV1OR21-1A0A087WYE8 117 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 VSTM2BA6NLU5 285 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 PRPSAP2O60256 369 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 SCGB2A1O75556 95 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 KIAA0754O94854 1291 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 P04436 131 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 CHTF8P0CG12 524 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 RBMY1CP0DJD4 496 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 ICAM2P13598 275 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 HNRNPA2B1P22626 353 aaKnown RBP2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 FGF9P31371 208 aaPredicted RBP2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 LONP1P36776 959 aaKnown RBP2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 TFPI2P48307 235 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 CCR6P51684 374 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 HSD17B7P56937 341 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 GGTLC2Q14390 218 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 ATL3Q6DD88 541 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 DENND6BQ8NEG7 585 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 ST8SIA1Q92185 356 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 RAPGEF5Q92565 580 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 RAB7BQ96AH8 199 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 PELOQ9BRX2 385 aaKnown RBP2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 KRT23Q9C075 422 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 CALHM2Q9HA72 323 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 SMPD3Q9NY59 655 aaPredicted RBP2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 RBAKQ9NYW8 714 aaPredicted RBP2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 PHF11Q9UIL8 331 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 SH3TC1Q8TE82 1336 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 CLSPNQ9HAW4 1339 aa2.88□□□□□ -1.95
SCAMP1-205ENST00000614488 ERVV-1B6SEH8 477 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 E9PBE3 544 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 G3V4G9 280 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 MOSP00540 346 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 KIR2DS4P43632 304 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 NSUN5P1Q3KNT7 163 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 TMEM41BQ5BJD5 291 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 FAM71F2Q6NXP2 309 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 PRSS41Q7RTY9 318 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 RALGPS2Q86X27 583 aaPredicted RBP2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 ZNF561Q8N587 486 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 CLDN19Q8N6F1 224 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 TPRX1Q8N7U7 411 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 DUSP18Q8NEJ0 188 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 OR10G3Q8NGC4 313 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 OR8H1Q8NGG4 311 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 KIR2DL5BQ8NHK3 375 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 GPA33Q99795 319 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 TBX21Q9UL17 535 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 RASD1Q9Y272 281 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 U3KQV3 271 aa2.87□□□□□ -1.95
SCAMP1-205ENST00000614488 A0A1W2PQ67 120 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms