RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SPANXN3Q5MJ09 141 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 FFAR4Q5NUL3 377 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANKRD22Q5VYY1 191 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 UGT3A1Q6NUS8 523 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRMT9Q6P2P2 845 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM199XQ6PEV8 388 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM198BQ6UWH4 519 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CES3Q6UWW8 571 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CYHR1Q6ZMK1 362 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CNTN4Q8IWV2 1026 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 KRT222Q8N1A0 295 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ADAD2Q8NCV1 583 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 NPEPL1Q8NDH3 523 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 TSPAN14Q8NG11 270 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR2L3Q8NG85 312 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR9A1PQ8NGU1 263 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR2Y1Q8NGV0 311 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 HPSE2Q8WWQ2 592 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 SMPDL3AQ92484 453 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 N4BP2L2Q92802 583 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 MR1Q95460 341 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLAMF9Q96A28 289 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 NXNL1Q96CM4 212 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 MS4A14Q96JA4 679 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ELMO2Q96JJ3 720 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 DGAT2Q96PD7 388 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 RUFY1Q96T51 708 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 NRTNQ99748 197 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 EBNA1BP2Q99848 306 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCDC106Q9BWC9 280 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ING2Q9H160 280 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 WDR54Q9H977 334 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF71Q9NQZ8 489 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM114A2Q9NRY5 505 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 OLAHQ9NV23 265 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 INTS9Q9NV88 658 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 EURLQ9NYK6 297 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 C5AR2Q9P296 337 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 FBXO5Q9UKT4 447 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 SNX7Q9UNH6 387 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PADI2Q9Y2J8 665 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 TDRKHQ9Y2W6 561 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 SAR1BQ9Y6B6 198 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PCNX1Q96RV3 2341 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 EML6Q6ZMW3 1958 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 DOPEY1Q5JWR5 2465 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CROCCQ5TZA2 2017 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGLV3-12A0A075B6K2 115 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 KCNE1BA0A087WTH5 132 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A087X002 238 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A1B0GX78 115 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 VSTM2BA6NLU5 285 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 HMGB1P1B2RPK0 211 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 GOLGA8KD6RF30 607 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 E7ESA3 106 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 GOLGA8TH3BQL2 631 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 TXNDC9O14530 226 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZBTB14O43829 449 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 VPS26AO75436 327 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 TRMUO75648 421 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ABCB1P08183 1280 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 LINGO3P0C6S8 592 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 RNF224P0DH78 156 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CA6P23280 308 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CMPK1P30085 196 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC1A2P43004 574 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 RGS4P49798 205 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CSE1LP55060 971 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ERVK11-1P61568 191 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM53BQ14153 422 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 PPP1R7Q15435 360 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 TAF13Q15543 124 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 KRTAP27-1Q3LI81 207 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCSMST1Q4G0I0 132 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 NKAIN1Q4KMZ8 207 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 C14orf177Q52M58 125 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 HSP90AA5PQ58FG0 334 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ACSBG2Q5FVE4 666 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ATP1A1-AS1Q5TC04 95 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 STEAP4Q687X5 459 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 GPR139Q6DWJ6 353 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF470Q6ECI4 717 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CASC4Q6P4E1 433 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CNSTQ6PJW8 725 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGFL2Q6UWQ7 119 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGFL3Q6UXB1 125 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CLEC18BQ6UXF7 455 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CYS1Q717R9 158 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 KCNMB4Q86W47 210 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 PAQR7Q86WK9 346 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 RAB43Q86YS6 212 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 PDIK1LQ8N165 341 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CD200R1Q8TD46 325 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCDC107Q8WV48 283 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANKRD7Q92527 254 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANP32BQ92688 251 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPDL1Q96EA4 605 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 CERS2Q96G23 380 aa3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 PDLIM5Q96HC4 596 aaKnown RBP3.16□□□□□ -1.9
CKS1BP3-201ENST00000600888 FER1L6-AS2Q96M78 137 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms