RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 MAOAP21397 527 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 RYKP34925 604 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 BMI1P35226 326 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NPBWR1P48145 328 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CARD18P57730 90 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 BTG2P78543 158 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 TFF3Q07654 80 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 SPOCK1Q08629 439 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NAE1Q13564 534 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 EXT1Q16394 746 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NDUFA9Q16795 377 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 MEP1AQ16819 746 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 DEFB134Q4QY38 66 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 PRR31Q5SQ13 230 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ADNP2Q6IQ32 1131 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CAPN13Q6MZZ7 669 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ANKRD16Q6P6B7 361 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 C4orf22Q6V702 233 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 QSOX2Q6ZRP7 698 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 MDGA2Q7Z553 956 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CD163Q86VB7 1156 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 IGFN1Q86VF2 1251 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 C17orf64Q86WR6 236 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 AQP12AQ8IXF9 295 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 LGI4Q8N135 537 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 APCDD1LQ8NCL9 501 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NFAM1Q8NET5 270 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ABHD11Q8NFV4 315 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 OR4K1Q8NGD4 311 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 M1APQ8TC57 530 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NT5CQ8TCD5 201 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 AGAP11Q8TF27 550 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 WIPF2Q8TF74 440 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CKAP2Q8WWK9 683 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NEIL2Q969S2 332 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ESAMQ96AP7 390 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 PGM2Q96G03 612 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC41A3Q96GZ6 507 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ZNF354BQ96LW1 612 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 TSNARE1Q96NA8 513 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CSF3RQ99062 836 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CPNE1Q99829 537 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 EBNA1BP2Q99848 306 aaKnown RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 FAM110AQ9BQ89 295 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CPPED1Q9BRF8 314 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 UTP23Q9BRU9 249 aaKnown RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NMNAT2Q9BZQ4 307 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 TRIM45Q9H8W5 580 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 MSL2Q9HCI7 577 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 ANKHQ9HCJ1 492 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 C20orf96Q9NUD7 363 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 C19orf73Q9NVV2 129 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 CNOT2Q9NZN8 540 aaKnown RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 C19orf25Q9UFG5 118 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 NPIPA1Q9UND3 350 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC22A7Q9Y694 548 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 AP4B1Q9Y6B7 739 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 COMMD3-BMI1R4GMX3 469 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 MED12LQ86YW9 2145 aa4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 RAI1Q7Z5J4 1906 aaPredicted RBP4.4□□□□□ -1.71
GAPLINC-202ENST00000579007 A0A0G2JN53 185 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 NPEPPSL1A6NEC2 478 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 DUXAA6NLW8 204 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CYR61O00622 381 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PFDN6O15212 129 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CHST10O43529 356 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 LANCL1O43813 399 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 WISP3O95389 354 aaPredicted RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 C8GP07360 202 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SP1P08047 785 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SMIM10L1P0DMW3 83 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 ICAM2P13598 275 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 RPA2P15927 270 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 LBPP18428 481 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PGAM1P18669 254 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 TNNI3P19429 210 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 HNRNPH1P31943 449 aaKnown RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 MC3RP41968 323 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 RIPPLY3P57055 190 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 OR4D2P58180 307 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 MLF1P58340 268 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 RAB8AP61006 207 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 HSF2Q03933 536 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 FOLH1Q04609 750 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 RIN1Q13671 783 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 FASTKD3Q14CZ7 662 aaKnown RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 HERC3Q15034 1050 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PDK3Q15120 406 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 NSDHLQ15738 373 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 C18orf21Q32NC0 220 aaPredicted RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CMPK2Q5EBM0 449 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SGO1Q5FBB7 561 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 RABL3Q5HYI8 236 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 DCST1Q5T197 706 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 DCAF12L2Q5VW00 463 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms