RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
DDX55-212ENST00000544738 FUT5Q11128 374 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 SYT14P1Q58G82 188 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 ZNF704Q6ZNC4 412 aaPredicted RBP14.37□□□□□ -0.11
DDX55-212ENST00000544738 TMPPEQ6ZT21 453 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 WFDC8Q8IUA0 241 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 CMIPQ8IY22 773 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 ARFGAP2Q8N6H7 521 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 HSD17B8Q92506 261 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 S100PBPQ96BU1 408 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 ZBTB9Q96C00 473 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 PLPPR2Q96GM1 343 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 TEX37Q96LM6 180 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 QRSL1Q9H0R6 528 aaKnown RBP14.37□□□□□ -0.11
DDX55-212ENST00000544738 WDR55Q9H6Y2 383 aaPredicted RBP14.37□□□□□ -0.11
DDX55-212ENST00000544738 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 LAMP3Q9UQV4 416 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 GPR45Q9Y5Y3 372 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 IGHV3-15A0A0B4J1V0 119 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 GOLGA8QA0A0J9YX86 632 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 GOLGA8OA6NCC3 632 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 ZNF724A8MTY0 619 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 GOLGA8NF8WBI6 632 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 SMAD9O15198 467 aaKnown RBP14.36□□□□□ -0.11
DDX55-212ENST00000544738 TMCC2O75069 709 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 H6PDO95479 791 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 PLAUP00749 431 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 ADAP00813 363 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 IL6P05231 212 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 TFPIP10646 304 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 IDO1P14902 403 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 RYKP34925 604 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 MAGEA8P43361 318 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 OR3A2P47893 321 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 CLK1P49759 484 aaKnown RBP14.36□□□□□ -0.11
DDX55-212ENST00000544738 DIO1P49895 249 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 ITGADQ13349 1161 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 GNA13Q14344 377 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 ZNF621Q6ZSS3 439 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 Q6ZT83 130 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 GRINAQ7Z429 371 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 MTDHQ86UE4 582 aaKnown RBP14.36□□□□□ -0.11
DDX55-212ENST00000544738 RNF130Q86XS8 419 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 MGARPQ8TDB4 240 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 KISS1RQ969F8 398 aaPredicted RBP14.36□□□□□ -0.11
DDX55-212ENST00000544738 ZG16BQ96DA0 208 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 ZHX1-C8orf76Q96EF9 292 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 CCDC106Q9BWC9 280 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 BEX2Q9BXY8 128 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 MANSC1Q9H8J5 431 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 MTHFD2LQ9H903 347 aaPredicted RBP14.36□□□□□ -0.11
DDX55-212ENST00000544738 CHRNA9Q9UGM1 479 aa14.36□□□□□ -0.11
DDX55-212ENST00000544738 KRT75O95678 551 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 KITP10721 976 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 IL12AP29459 219 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 HTR3AP46098 478 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 MAGOHP61326 146 aaKnown RBP14.35□□□□□ -0.11
DDX55-212ENST00000544738 CHRNEQ04844 493 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 PDK3Q15120 406 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 LRRC74BQ6ZQY2 392 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 SSX8Q7RTT4 187 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 GALNT5Q7Z7M9 940 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 ZNF611Q8N823 705 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 TRMT61AQ96FX7 289 aaKnown RBP14.35□□□□□ -0.11
DDX55-212ENST00000544738 TMEM204Q9BSN7 226 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 CTPS2Q9NRF8 586 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 EMC3Q9P0I2 261 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 ING1Q9UK53 422 aaPredicted RBP14.35□□□□□ -0.11
DDX55-212ENST00000544738 CDC42EP3Q9UKI2 254 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 PRDM4Q9UKN5 801 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 HDGFL3Q9Y3E1 203 aa14.35□□□□□ -0.11
DDX55-212ENST00000544738 PRAMEF27A3QJZ7 478 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 AGAP5A6NIR3 686 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 RFXANKO14593 260 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 HS3ST1O14792 307 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 DNPH1O43598 174 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 SLC22A3O75751 556 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 PMS2P2O95744 297 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 FESP07332 822 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 NR2F1P10589 423 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 ACVR1BP36896 505 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 MAP2K6P52564 334 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 RPS4XP62701 263 aaKnown RBP14.34□□□□□ -0.11
DDX55-212ENST00000544738 SYPL1Q16563 259 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 GSTA3Q16772 222 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 PDCD4Q53EL6 469 aaKnown RBP14.34□□□□□ -0.11
DDX55-212ENST00000544738 ADAM5Q6NVV9 412 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 ZNF100Q8IYN0 542 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 MAELQ96JY0 434 aaKnown RBP14.34□□□□□ -0.11
DDX55-212ENST00000544738 INPP5KQ9BT40 448 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 SLC38A1Q9H2H9 487 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 ESRP2Q9H6T0 727 aaKnown RBP14.34□□□□□ -0.11
DDX55-212ENST00000544738 RAI1Q7Z5J4 1906 aaPredicted RBP14.34□□□□□ -0.11
DDX55-212ENST00000544738 CR1P17927 2039 aa14.34□□□□□ -0.11
DDX55-212ENST00000544738 IGKV3D-15A0A087WSY6 115 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 ZNF814B7Z6K7 855 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 C9JVG2 144 aa14.33□□□□□ -0.12
DDX55-212ENST00000544738 GPR171O14626 319 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms