RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PIK3C3Q8NEB9 887 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 OR14L1PQ8NHC6 308 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 DNAJC9Q8WXX5 260 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC38A4Q969I6 547 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC47A1Q96FL8 570 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 PRRC1Q96M27 445 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 NR1H4Q96RI1 486 aaPredicted RBP9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 SEPHS2Q99611 448 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 TIMP4Q99727 224 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 TRIM2Q9C040 744 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 CACYBPQ9HB71 228 aaKnown RBP9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 VNN3Q9NY84 501 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 RIMS3Q9UJD0 308 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 ZGRF1Q86YA3 2104 aa9.62□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A087WUJ7 227 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 TMED7-TICAM2A0A0A6YYA0 188 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 TRGV5A0A0B4J1U4 118 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A1B0GTH9 108 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 MAGEA13PA6NCF6 341 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 KDM4EB2RXH2 506 aaPredicted RBP9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 FZD7O75084 574 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ENTPD5O75356 428 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 OR5F1O95221 314 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 NUDT14O95848 222 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 OPN1LWP04000 364 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 IFNW1P05000 195 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 GPIP06744 558 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 RAP2AP10114 183 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 UMPSP11172 480 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 GP1BBP13224 206 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ZNF708P17019 499 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 EIF1P41567 113 aaKnown RBP9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ZNF41P51814 821 aaPredicted RBP9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 GTF3C1Q12789 2109 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 MERTKQ12866 999 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 TOMM20Q15388 145 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 C3AR1Q16581 482 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 RAET1LQ5VY80 246 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ULK3Q6PHR2 472 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 FAM180AQ6UWF9 173 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 FKBP9P1Q75LS8 142 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 RANBP3LQ86VV4 465 aaPredicted RBP9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 SPATA24Q86W54 205 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ZDHHC21Q8IVQ6 265 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 NKAIN4Q8IVV8 208 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 OFCC1Q8IZS5 231 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ZNF563Q8TA94 476 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 CPT1CQ8TCG5 803 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC41A3Q96GZ6 507 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 WDYHV1Q96HA8 205 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 PIGQQ9BRB3 760 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 PTDSS2Q9BVG9 487 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 COQ10BQ9H8M1 238 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 NMNAT1Q9HAN9 279 aaPredicted RBP9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 C12orf10Q9HB07 376 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 NTN4Q9HB63 628 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 RHCGQ9UBD6 479 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC13A4Q9UKG4 626 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 ZNF835Q9Y2P0 537 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 TMED7Q9Y3B3 224 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 HIVEP3Q5T1R4 2406 aa9.61□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A0J9YW62 118 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TRAPPC13A5PLN9 417 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 B8ZZF3 427 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 ADAMDEC1O15204 470 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 CHP2O43745 196 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 FKBP6O75344 327 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 FABP3P05413 133 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 PEPDP12955 493 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 EDN3P14138 238 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 RHCEP18577 417 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 KLK2P20151 261 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 ELK4P28324 431 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC7A1P30825 629 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 APOBEC1P41238 236 aaKnown RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 POLR2HP52434 150 aaKnown RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 HMGA2P52926 109 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 RAC1P63000 192 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 LTBQ06643 244 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 SEC23BQ15437 767 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 KRTCAP3Q53RY4 240 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TMEM179BQ7Z7N9 219 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 ADGRE4PQ86SQ3 457 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 P3H2Q8IVL5 708 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 LILRA2Q8N149 483 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 OR4C15Q8NGM1 316 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC7A13Q8TCU3 470 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TMEM255BQ8WV15 326 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 DNAJA4Q8WW22 397 aaPredicted RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TMEM234Q8WY98 164 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 ABTB1Q969K4 478 aaPredicted RBP9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 RELTQ969Z4 430 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 MIB2Q96AX9 1013 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 ARL5BQ96KC2 179 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 LRGUKQ96M69 825 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 SFXN2Q96NB2 322 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 TRIM15Q9C019 465 aa9.6□□□□□ -0.87
NPIPB3-210ENST00000542817 OR11A1Q9GZK7 315 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms