RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 TRMUO75648 421 aaKnown RBP13.68□□□□□ -0.22
SREK1-209ENST00000520953 IGFBP1P08833 259 aaPredicted RBP13.68□□□□□ -0.22
SREK1-209ENST00000520953 HTR1AP08908 422 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 FUT1P19526 365 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 EPHA2P29317 976 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 SH3BGRP55822 239 aaPredicted RBP13.68□□□□□ -0.22
SREK1-209ENST00000520953 SOX8P57073 446 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 TLE3Q04726 772 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 OR1C1Q15619 314 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 ZSWIM7Q19AV6 140 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 CRTC2Q53ET0 693 aaPredicted RBP13.68□□□□□ -0.22
SREK1-209ENST00000520953 BROXQ5VW32 411 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 PGBD2Q6P3X8 592 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 ZNF613Q6PF04 617 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 ZER1Q7Z7L7 766 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 NRMQ8IXM6 262 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 OR5M1Q8NGP8 315 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 ISOC1Q96CN7 298 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 UTP23Q9BRU9 249 aaKnown RBP13.68□□□□□ -0.22
SREK1-209ENST00000520953 KLHL1Q9NR64 748 aa13.68□□□□□ -0.22
SREK1-209ENST00000520953 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
SREK1-209ENST00000520953 CBLP22681 906 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 RFC3P40938 356 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 CD97P48960 835 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 XAF1Q6GPH4 301 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 ZNF730Q6ZMV8 503 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 CCDC81Q6ZN84 652 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 ZNF440Q8IYI8 595 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 OR2M3Q8NG83 312 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 SGCZQ96LD1 299 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 CNIH4Q9P003 139 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
SREK1-209ENST00000520953 TAF4O00268 1085 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 SLC1A7O00341 560 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 FAAHO00519 579 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 TACR3P29371 465 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 GABARAPL2P60520 117 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 COPZ1P61923 177 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 IL5RAQ01344 420 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 CBFBQ13951 182 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 WBP2NLQ6ICG8 309 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 Q6ZPB1 254 aaPredicted RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 CNIH3Q8TBE1 160 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 FAM46AQ96IP4 442 aaKnown RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 KRT84Q9NSB2 600 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 KIF17Q9P2E2 1029 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 RPS6KB2Q9UBS0 482 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 FREM3P0C091 2139 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 ANKUB1A6NFN9 424 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 LRRN3E7EW58 273 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 CHP2O43745 196 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 SLC25A12O75746 678 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 JUNBP17275 347 aaPredicted RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 IL11P20809 199 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 GPR4P46093 362 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 CDK5R2Q13319 367 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 KEAP1Q14145 624 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 SLC30A6Q6NXT4 461 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 ULK3Q6PHR2 472 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 ATG4DQ86TL0 474 aaPredicted RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 MISPQ8IVT2 679 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 FADS6Q8N9I5 356 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 SLC38A4Q969I6 547 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 SECISBP2Q96T21 854 aaKnown RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 SACM1LQ9NTJ5 587 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 MED17Q9NVC6 651 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
SREK1-209ENST00000520953 DKK4Q9UBT3 224 aa13.66□□□□□ -0.22
SREK1-209ENST00000520953 IGLV3-32A0A0A0MS00 114 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 LRRC3CA6NJW4 275 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 ZNF701M0R085 212 aaPredicted RBP13.65□□□□□ -0.22
SREK1-209ENST00000520953 P04436 131 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 RFPL3SP0C7P2 107 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 TTKP33981 857 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 SLC1A3P43003 542 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 SMIM11AP58511 58 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 PIGFQ07326 219 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 MFAP5Q13361 173 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 SNTA1Q13424 505 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 TMEM81Q6P7N7 255 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 LINC00114Q6XXX2 140 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.22
SREK1-209ENST00000520953 DND1Q8IYX4 353 aaKnown RBP13.65□□□□□ -0.22
SREK1-209ENST00000520953 SPARTQ8N0X7 666 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 TMEM239Q8WW34 195 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 ACOT11Q8WXI4 607 aaPredicted RBP13.65□□□□□ -0.22
SREK1-209ENST00000520953 C12orf43Q96C57 262 aaKnown RBP13.65□□□□□ -0.22
SREK1-209ENST00000520953 TUBA1CQ9BQE3 449 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 ADAM19Q9H013 955 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 TAS2R10Q9NYW0 307 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 AASSQ9UDR5 926 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 OSGIN1Q9UJX0 560 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 BLOC1S6Q9UL45 172 aa13.65□□□□□ -0.22
SREK1-209ENST00000520953 NDRG4Q9ULP0 352 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms