RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 OPN1SWP03999 348 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 TFPIP10646 304 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 PRG2P13727 222 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 CXCR1P25024 350 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 SHC1P29353 583 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 KDELR2P33947 212 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 ZNF136P52737 540 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 RAC3P60763 192 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 CSNK2A1P68400 391 aaPredicted RBP13.46□□□□□ -0.25
RNF4-210ENST00000508235 DUSP7Q16829 419 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 LSMEM1Q8N8F7 131 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 FNDC9Q8TBE3 224 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.25
RNF4-210ENST00000508235 LZICQ8WZA0 190 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 FIG4Q92562 907 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 PROX1Q92786 737 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 TAMM41Q96BW9 452 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 NSL1Q96IY1 281 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 KCTD14Q9BQ13 255 aaPredicted RBP13.46□□□□□ -0.25
RNF4-210ENST00000508235 ZNF559Q9BR84 538 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 RNF122Q9H9V4 155 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 TMEM27Q9HBJ8 222 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 KCNJ16Q9NPI9 418 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 GLRX2Q9NS18 164 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 ADA2Q9NZK5 511 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 SELENONQ9NZV5 590 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 PLEKHB1Q9UF11 243 aaPredicted RBP13.46□□□□□ -0.25
RNF4-210ENST00000508235 SLC9A8Q9Y2E8 581 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 MED12LQ86YW9 2145 aa13.46□□□□□ -0.26
RNF4-210ENST00000508235 PCNX1Q96RV3 2341 aa13.46□□□□□ -0.26
RNF4-210ENST00000508235 DOPEY2Q9Y3R5 2298 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 DNPH1O43598 174 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 FMO6PO60774 539 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 CLDN1O95832 211 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 PLGP00747 810 aaPredicted RBP13.45□□□□□ -0.26
RNF4-210ENST00000508235 FESP07332 822 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 HTR1EP28566 365 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 TMPPEQ6ZT21 453 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 SLC43A2Q8N370 569 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 NAXEQ8NCW5 288 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 INTS12Q96CB8 462 aaKnown RBP13.45□□□□□ -0.26
RNF4-210ENST00000508235 ZHX1-C8orf76Q96EF9 292 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 ARHGDIGQ99819 225 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 PIGMQ9H3S5 423 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 COQ10BQ9H8M1 238 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 C12orf10Q9HB07 376 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 ADPRHL2Q9NX46 363 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 TMEM181Q9P2C4 612 aa13.45□□□□□ -0.26
RNF4-210ENST00000508235 ELOA3DA6NLF2 546 aaPredicted RBP13.44□□□□□ -0.26
RNF4-210ENST00000508235 FAM90A27PA6NNH2 459 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 SULT2B1O00204 365 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 FRS3O43559 492 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 GMNNO75496 209 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 PMS2P2O95744 297 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 PNMTP11086 282 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 CCNA2P20248 432 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 CD247P20963 164 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 BMP5P22003 454 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 CALB2P22676 271 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 GSK3BP49841 420 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 DIO1P49895 249 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 HOXC5Q00444 222 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 RNPS1Q15287 305 aaKnown RBP13.44□□□□□ -0.26
RNF4-210ENST00000508235 ZNF239Q16600 458 aaKnown RBP13.44□□□□□ -0.26
RNF4-210ENST00000508235 NRF1Q16656 503 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 ELOA3BQ3SY89 546 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 SPATS1Q496A3 300 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 LRRC23Q53EV4 343 aaPredicted RBP13.44□□□□□ -0.26
RNF4-210ENST00000508235 SAMD4BQ5PRF9 694 aaKnown RBP13.44□□□□□ -0.26
RNF4-210ENST00000508235 ULK3Q6PHR2 472 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 ELOA3Q8NG57 546 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 GPR32P1Q8NGA4 272 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 C3orf49Q96BT1 292 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 GMPPAQ96IJ6 420 aaPredicted RBP13.44□□□□□ -0.26
RNF4-210ENST00000508235 POTEKPQ9BYX7 375 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 USP22Q9UPT9 525 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 TRAPPC4Q9Y296 219 aa13.44□□□□□ -0.26
RNF4-210ENST00000508235 TENM4Q6N022 2769 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 A0A1W2PNR3 127 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 TMEM72A0PK05 275 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 A8MVM7 634 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 CXCR6O00574 342 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 AQP8O94778 261 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 ENPP1P22413 925 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 CRYBA2P53672 197 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 MYBPHQ13203 477 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 CYBRD1Q53TN4 286 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 ALG10BQ5I7T1 473 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 SWT1Q5T5J6 900 aaKnown RBP13.43□□□□□ -0.26
RNF4-210ENST00000508235 ZNF613Q6PF04 617 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 C5orf46Q6UWT4 87 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 PLXDC2Q6UX71 529 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 TRPM8Q7Z2W7 1104 aa13.43□□□□□ -0.26
RNF4-210ENST00000508235 ATG4DQ86TL0 474 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms