RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OR5M9Q8NGP3 310 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 MYLIPQ8WY64 445 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 NSMAFQ92636 917 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 SLC25A38Q96DW6 304 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 COX14Q96I36 57 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 ZNF558Q96NG5 402 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 ORAI3Q9BRQ5 295 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 DNTTIP1Q9H147 329 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 OR51V1Q9H2C8 321 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 A0A1B0GW55 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 D6RAR5 112 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 PTP4A3O75365 173 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 LRG1P02750 347 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 PRNPP04156 253 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 MRPL3P09001 348 aaKnown RBP16.4■□□□□ 0.22
NUP54-205ENST00000507257 OR2T7P0C7T2 308 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4L2P0CJ85 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4L3P0CJ86 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4L4P0CJ87 422 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4L5P0CJ88 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4L6P0CJ89 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4L7P0CJ90 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 C6P13671 934 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 RPS4Y1P22090 263 aaKnown RBP16.4■□□□□ 0.22
NUP54-205ENST00000507257 PTH2RP49190 550 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 GGTLC2Q14390 218 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 MPPED2Q15777 294 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 ZNF750Q32MQ0 723 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 OR5M10Q6IEU7 315 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 MFSD12Q6NUT3 480 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 CDK20Q8IZL9 346 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 POMGNT2Q8NAT1 580 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 OR2L5Q8NG80 312 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 OR9A2Q8NGT5 310 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 OR2T27Q8NH04 317 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 OR4C6Q8NH72 309 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 PELI1Q96FA3 418 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 MS4A4EQ96PG1 132 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 KLHL31Q9H511 634 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 DUX4Q9UBX2 424 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 ZNF69Q9UC07 566 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 OPN4Q9UHM6 478 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 AK6Q9Y3D8 172 aaKnown RBP16.4■□□□□ 0.22
NUP54-205ENST00000507257 WDR45Q9Y484 360 aa16.4■□□□□ 0.22
NUP54-205ENST00000507257 IGKV1-8A0A0C4DH67 115 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 IFITM5A6NNB3 132 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 MPTX1A8MV57 137 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ACOT7O00154 380 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 KHDRBS3O75525 346 aaKnown RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 NDUFS1P28331 727 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 NOS3P29474 1203 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PTGER1P34995 402 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PPP2CBP62714 309 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PPP2CAP67775 309 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 SIRPAP78324 504 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 FLI1Q01543 452 aaPredicted RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 LINC00303Q3SY05 128 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 POM121L1PQ3SYA9 428 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 THSD4Q6ZMP0 1018 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 WDR88Q6ZMY6 472 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 UBE2Q1Q7Z7E8 422 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 LINC01555Q8NAE3 123 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 DNAAF1Q8NEP3 725 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 OR1S1Q8NH92 325 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ORAI1Q96D31 301 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ZNF416Q9BWM5 594 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 EQTNQ9NQ60 294 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ICAM5Q9UMF0 924 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ZNF175Q9Y473 711 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 KPNA3O00505 521 aaPredicted RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 SELENOFO60613 162 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PCDH8O95206 1070 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 IFNGP01579 166 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 CXCL10P02778 98 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ADRB1P08588 477 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 CALCBP10092 127 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ELNP15502 786 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 POU3F2P20265 443 aaPredicted RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 KIAA1024LP59773 190 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 CRMP1Q14194 572 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ZNF169Q14929 603 aaPredicted RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 LRFN4Q6PJG9 635 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 GSG1LQ6UXU4 331 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 SSX6Q7RTT6 188 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 MCATQ8IVS2 390 aaKnown RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 CDH26Q8IXH8 852 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 IZUMO1Q8IYV9 350 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PFN4Q8NHR9 129 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 COQ8AQ8NI60 647 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PEX11GQ96HA9 241 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 EVA1AQ9H8M9 152 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PCDHB16Q9NRJ7 776 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 C20orf141Q9NUB4 165 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ANKRD10Q9NXR5 420 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 TAS2R10Q9NYW0 307 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 PCYT1BQ9Y5K3 369 aaPredicted RBP16.39■□□□□ 0.21
NUP54-205ENST00000507257 ZNF780BQ9Y6R6 833 aa16.39■□□□□ 0.21
NUP54-205ENST00000507257 ANXA2P2A6NMY6 339 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 C4orf51C9J302 202 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms