RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 TMEM159Q96B96 161 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 SGTBQ96EQ0 304 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 ZBED6CLQ96FA7 236 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 APIPQ96GX9 242 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 SORCS2Q96PQ0 1159 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 NEDD4LQ96PU5 975 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 OR5M11Q96RB7 305 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 IL4I1Q96RQ9 567 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 LMF1Q96S06 567 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 THAP7Q9BT49 309 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 DPH1Q9BZG8 443 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 SPRTNQ9H040 489 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 PCBD2Q9H0N5 130 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 CHST8Q9H2A9 424 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 OR51J1Q9H342 316 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 PPP1R3EQ9H7J1 279 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 NMNAT1Q9HAN9 279 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 NMUR1Q9HB89 426 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 AMBNQ9NP70 447 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 MYNNQ9NPC7 610 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 MIEF1Q9NQG6 463 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 DMRT3Q9NQL9 472 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 ITM2CQ9NQX7 267 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 CYSLTR2Q9NS75 346 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 FARSBQ9NSD9 589 aaKnown RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 IMP3Q9NV31 184 aaKnown RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 ELOVL2Q9NXB9 296 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 SLC39A1Q9NY26 324 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 RDH8Q9NYR8 311 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 ZNF224Q9NZL3 707 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 PTGFRNQ9P2B2 879 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 COMMD3Q9UBI1 195 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 P2RX2Q9UBL9 471 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 PLEKHB1Q9UF11 243 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 TESQ9UGI8 421 aaKnown RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 LIPT1Q9Y234 373 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 DLGAP4Q9Y2H0 992 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 CACNG2Q9Y698 323 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 CFAP20Q9Y6A4 193 aaKnown RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 SDK1Q7Z5N4 2213 aa4.54□□□□□ -1.68
LRCH3-214ENST00000473177 KIF26AQ9ULI4 1882 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-214ENST00000473177 SPAG17Q6Q759 2223 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 THADAQ6YHU6 1953 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 PLXNB3Q9ULL4 1909 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 PRAMEF33A0A0G2JMD5 474 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 A0A0G2JPF8 293 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 LINC00854A0A1B0GVQ3 168 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 UBE2QL1A1L167 161 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 C7orf66A4D0T2 115 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 FAM171A2A8MVW0 826 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 ISM1B1AKI9 464 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 HNRNPCL2B2RXH8 293 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 HNRNPCL3B7ZW38 293 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 LRRN3E7EW58 273 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 TEX46H3BTG2 121 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 LEFTY2O00292 366 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 CTDSPLO15194 276 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 PLA2G10O15496 165 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 TSPAN6O43657 245 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 TLX2O43763 284 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 SSNA1O43805 119 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 PLOD3O60568 738 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 PRAMEF10O60809 474 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 TSC22D2O75157 780 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 DNAJB6O75190 326 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 SLCO2B1O94956 709 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 DIRAS1O95057 198 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 UBL3O95164 117 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 POP4O95707 220 aaKnown RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 IL33O95760 270 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 RPN2P04844 631 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 SERPIND1P05546 499 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 IL3P08700 152 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 HNRNPCL4P0DMR1 293 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 PF4V1P10720 104 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 LAMP1P11279 417 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 SFTPCP11686 197 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 HMGA1P17096 107 aaKnown RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 RAB3AP20336 220 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 NPR2P20594 1047 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 ZP3P21754 424 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 DNASE1P24855 282 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 HOXD9P28356 352 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 NUP62P37198 522 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 CDKN2CP42773 168 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 GDF5P43026 501 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 MAN2A2P49641 1150 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 ARFIP1P53367 373 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 NUDT6P53370 316 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 WNT3P56703 355 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 RAP2BP61225 183 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 ACTC1P68032 377 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 ACTA1P68133 377 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 C2orf80Q0P641 193 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 ILF3Q12906 894 aaKnown RBP eCLIP4.53□□□□□ -1.685e-7■■■□□ 19.1
LRCH3-214ENST00000473177 SLAMF1Q13291 335 aa4.53□□□□□ -1.68
LRCH3-214ENST00000473177 SNTB2Q13425 540 aaKnown RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 DDX39BQ13838 428 aaKnown RBP4.53□□□□□ -1.68
LRCH3-214ENST00000473177 GINS1Q14691 196 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms