RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MLC1Q15049 377 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 VMACQ2NL98 169 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PLPPR5Q32ZL2 321 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 IL23RQ5VWK5 629 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 HBMQ6B0K9 141 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 CDC73Q6P1J9 531 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PLEKHM3Q6ZWE6 761 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 IKBIPQ70UQ0 350 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 HMGN2P46Q86SG4 172 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PRIMA1Q86XR5 153 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 TUSC5Q8IXB3 177 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 LRRC75A-AS1Q8N1F1 130 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF619Q8N2I2 560 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 GTPBP8Q8N3Z3 284 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF614Q8N883 585 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 COX18Q8N8Q8 333 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 CDRT4Q8N9R6 151 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 OR5D16Q8NGK9 328 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 OR6Y1Q8NGX8 325 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 OR6K3Q8NGY3 331 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 OR5AK3PQ8NH89 298 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 OR2V1Q8NHB1 315 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 LILRB1Q8NHL6 650 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 B4GALNT2Q8NHY0 566 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 TCP10LQ8TDR4 215 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 TWIST2Q8WVJ9 160 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 AKAP1Q92667 903 aaKnown RBP eCLIP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 S100PBPQ96BU1 408 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 DNAJA3Q96EY1 480 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 GMPPAQ96IJ6 420 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ADGRG7Q96K78 797 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 FCRL1Q96LA6 429 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PPP1R36Q96LQ0 422 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 MS4A4EQ96PG1 132 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PIP5K1AQ99755 562 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 BDH2Q9BUT1 245 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 C1orf50Q9BV19 199 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ACTR6Q9GZN1 396 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ACSS1Q9NUB1 689 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZCCHC3Q9NUD5 404 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 NTMQ9P121 344 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 PRSS50Q9UI38 385 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ZDHHC2Q9UIJ5 367 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 MCTS1Q9ULC4 181 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 LAMP3Q9UQV4 416 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 CARD8Q9Y2G2 431 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 ARFGEF3Q5TH69 2177 aa4.17□□□□□ -1.74
GTF3C3-208ENST00000455546 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SONP18583 2426 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 HIVEP2P31629 2446 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 MALRD1Q5VYJ5 2156 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 MAP1AP78559 2803 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 JMJD1CQ15652 2540 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 A0A087WZY1 265 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CENPVL1A0A0U1RR11 272 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 WDR91A4D1P6 747 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TTC36A6NLP5 189 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF814B7Z6K7 855 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 INAFM1C9JVW0 142 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 H3BQF6 201 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 KIF2AO00139 706 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 GTPBP1O00178 669 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SCAMP2O15127 329 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CLOCKO15516 846 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CFLARO15519 480 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ITM2AO43736 263 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 FCMRO60667 390 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TBX19O60806 448 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 RAMP1O60894 148 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SS18L1O75177 396 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 NDUFS7O75251 213 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SKAP2O75563 359 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 GCM2O75603 506 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 LYPLA1O75608 230 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CYP7B1O75881 506 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CHEK2O96017 543 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 C1QCP02747 245 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 HEXAP06865 529 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TUBBP07437 444 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 FCGR2AP12318 317 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ME2P23368 584 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 AGTR1P30556 359 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 PCYT1AP49585 367 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 P2RX1P51575 399 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ATP5J2P56134 94 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 NAA20P61599 178 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 HBA1P69905 142 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF844Q08AG5 666 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 FOXF1Q12946 379 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TNK1Q13470 666 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CAPRIN1Q14444 709 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 GPR68Q15743 365 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TAB1Q15750 504 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 PGS1Q32NB8 556 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SPDYE7PQ495Y7 208 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 VPS26BQ4G0F5 336 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 KLHL26Q53HC5 615 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 BEX5Q5H9J7 111 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 C6orf136Q5SQH8 315 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 DCST2Q5T1A1 773 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms