RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 REP15Q6BDI9 236 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR4F3Q6IEY1 312 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 DLK2Q6UY11 383 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF782Q6ZMW2 699 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 APTXQ7Z2E3 356 aaKnown RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM144Q7Z5S9 345 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 TECPR1Q7Z6L1 1165 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMED4Q7Z7H5 227 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 GLCCI1Q86VQ1 547 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 C1orf87Q8N0U7 546 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC35F6Q8N357 371 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 C12orf45Q8N5I9 185 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 BCORP1Q8N888 145 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 GDPD1Q8N9F7 314 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 LMNTD1Q8N9Z9 388 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 AQP11Q8NBQ7 271 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 FAM46DQ8NEK8 389 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR4M2Q8NGB6 313 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR13D1Q8NGV5 346 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRMT10AQ8TBZ6 339 aaKnown RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 MARCH1Q8TCQ1 289 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 PIH1D2Q8WWB5 315 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 NRG4Q8WWG1 115 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM45BQ96B21 275 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANKRD9Q96BM1 317 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAB3CQ96E17 227 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 ARSGQ96EG1 525 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 PPP1R16AQ96I34 528 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAX2Q96IS3 184 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 MARK4Q96L34 752 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 HARBI1Q96MB7 349 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 SFXN2Q96NB2 322 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 ALKBH3Q96Q83 286 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 CCDC3Q9BQI4 270 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 THAP7Q9BT49 309 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 ROPN1BQ9BZX4 212 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 SDCBP2Q9H190 292 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 BOLA2Q9H3K6 86 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 RHOFQ9HBH0 211 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 SGK2Q9HBY8 427 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 EML4Q9HC35 981 aaKnown RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 FAM207AQ9NSI2 230 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 COPS7AQ9UBW8 275 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR12D3Q9UGF7 316 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 SCP2D1Q9UJQ7 156 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 FZD4Q9ULV1 537 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 SSR3Q9UNL2 185 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 FLVCR2Q9UPI3 526 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 DRG1Q9Y295 367 aaKnown RBP4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADGRA3Q8IWK6 1321 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 CEMIPQ8WUJ3 1361 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 OVOS2A0A0G2JMS6 1433 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 A0A0C4DFX4 3053 aa4.35□□□□□ -1.71
HMGB3P9-201ENST00000441799 LOC100509620A0A075B734 347 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 A0A1B0GTW7 788 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 C13orf42A0A1B0GVH6 325 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NEMP2A6NFY4 417 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SAGE2PA6NJ88 616 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANKRD66B4E2M5 251 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DISC1C4P0D8 188 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSTD3H0UI37 97 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TEX46H3BTG2 121 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 M0R036 132 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DFFAO00273 331 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DLGAP1O14490 977 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 COPEO14579 308 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TP53I11O14683 189 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 UBDO15205 165 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 DNPH1O43598 174 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LCMT2O60294 686 aaKnown RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 KRT33AO76009 404 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR2F2O95006 317 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 VAPBO95292 243 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 LY86O95711 162 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSPAN12O95859 305 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 BMP15O95972 392 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 C9P02748 559 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 FTH1P02794 183 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MT-ND1P03886 318 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 RLN1P04808 185 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SERPIND1P05546 499 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 NPSP0C0P6 89 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 C1GALT1C1LP0DN25 315 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 RRASP10301 218 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 CETPP11597 493 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANXA3P12429 323 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF44P15621 663 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF37AP17032 561 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 HLA-GP17693 338 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 GM2AP17900 193 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 S1PR1P21453 382 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACHEP22303 614 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MARK3P27448 753 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 HTR2AP28223 471 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PTPN7P35236 360 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 SPRP35270 261 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 COILP38432 576 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 PBX1P40424 430 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 AQP2P41181 271 aa4.34□□□□□ -1.71
HMGB3P9-201ENST00000441799 MAP2K4P45985 399 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms