RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 KLHDC3Q9BQ90 382 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 TBC1D17Q9HA65 648 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 MED17Q9NVC6 651 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 SIRT4Q9Y6E7 314 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 RNF215Q9Y6U7 377 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 RP1P56715 2156 aa13.97□□□□□ -0.17
SCAMP4-202ENST00000409472 A0A075B6Q4 140 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 CD1CP29017 333 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ATP6V1E1P36543 226 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ETV6P41212 452 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNHIT3Q15649 155 aaPredicted RBP13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF79Q15937 498 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 SPANXN2Q5MJ10 180 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF613Q6PF04 617 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 XKRXQ6PP77 449 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF767PQ75MW2 155 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 C17orf82Q86X59 251 aaPredicted RBP13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 KLBQ86Z14 1044 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF595Q8IYB9 648 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 LNX2Q8N448 690 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 LRRC17Q8N6Y2 441 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 BCORP1Q8N888 145 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 C1orf216Q8TAB5 229 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 PTP4A1Q93096 173 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 TSLPQ969D9 159 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 SLC25A46Q96AG3 418 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 RNF170Q96K19 258 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 TNFRSF13CQ96RJ3 184 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF559Q9BR84 538 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 ZNF426Q9BUY5 554 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 HDHD5Q9BXW7 423 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 OR10A5Q9H207 317 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 TMEM27Q9HBJ8 222 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 MCCC2Q9HCC0 563 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 PLEKHB1Q9UF11 243 aaPredicted RBP13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 CLCA3PQ9Y6N3 262 aa13.96□□□□□ -0.17
SCAMP4-202ENST00000409472 A8MUA0 341 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 STK25O00506 426 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 BET1O15155 118 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 OIP5O43482 229 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 NCR1O76036 304 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 IFI6P09912 130 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 PRKACAP17612 351 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 CELP19835 753 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 RORCP51449 518 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 FOXL2P58012 376 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 OR1D5P58170 312 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 PSPHP78330 225 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 CFHR1Q03591 330 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 CRYZQ08257 329 aaKnown RBP13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 CRMP1Q14194 572 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 FGFBP1Q14512 234 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 BMP8AQ7Z5Y6 402 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 RAB43Q86YS6 212 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 RNF113BQ8IZP6 322 aaKnown RBP13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 RFLNBQ8N5W9 214 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 ZNF615Q8N8J6 731 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC37A3Q8NCC5 494 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC30A2Q9BRI3 323 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 KATNB1Q9BVA0 655 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 TTTY10Q9BZA0 68 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 MIXL1Q9H2W2 232 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 KRCC1Q9NPI7 259 aaPredicted RBP13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 POLE3Q9NRF9 147 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 DHCR7Q9UBM7 475 aaKnown RBP13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 TNFRSF10DQ9UBN6 386 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 MUTYHQ9UIF7 546 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 PLCL2Q9UPR0 1127 aa13.96□□□□□ -0.18
SCAMP4-202ENST00000409472 ARID1BQ8NFD5 2236 aaPredicted RBP13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 CCDC182A6NF36 153 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 TLCD2A6NGC4 264 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 C17orf51A8MQB3 221 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 LOC110117498-PIK3R3F6TDL0 507 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 PRAMEF2O60811 474 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 HMGN1P05114 100 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 BMP7P18075 431 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 CTBP2P56545 445 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 NXPH1P58417 271 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 DSG2Q14126 1118 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 SMAD2Q15796 467 aaKnown RBP13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 PRPF38BQ5VTL8 546 aaKnown RBP13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 TTLL10Q6ZVT0 673 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 OR6C4Q8NGE1 309 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 ZNF524Q96C55 264 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 OR51V1Q9H2C8 321 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 MRPS33Q9Y291 106 aaKnown RBP13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 OR10H1Q9Y4A9 318 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 A0A0X1KG70 313 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 IRGMA1A4Y4 181 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC35F4A4IF30 521 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 AGRPO00253 132 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 IMPA2O14732 288 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 PTP4A3O75365 173 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 GABRA5P31644 462 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC16A1P53985 500 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 FUT7Q11130 342 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 GPR50Q13585 617 aa13.95□□□□□ -0.18
SCAMP4-202ENST00000409472 ZNF322Q6U7Q0 402 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms