RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 LILRA2Q8N149 483 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 PIK3C3Q8NEB9 887 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 FAM57AQ8TBR7 257 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 CANT1Q8WVQ1 401 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 SLC41A3Q96GZ6 507 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 PRSS27Q9BQR3 290 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 TMEM43Q9BTV4 400 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 EXO5Q9H790 373 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 CCM2LQ9NUG4 571 aaPredicted RBP12.71□□□□□ -0.37
VPS25-201ENST00000253794 RIMS3Q9UJD0 308 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 TMED7Q9Y3B3 224 aa12.71□□□□□ -0.37
VPS25-201ENST00000253794 IGKV1D-42A0A075B6H8 117 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 CPSF4LA6NMK7 179 aaKnown RBP12.7□□□□□ -0.38
VPS25-201ENST00000253794 EIF4E1BA6NMX2 242 aaKnown RBP12.7□□□□□ -0.38
VPS25-201ENST00000253794 A8MVM7 634 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 CXCR1P25024 350 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 IFNA8P32881 189 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 RBM34P42696 430 aaKnown RBP12.7□□□□□ -0.38
VPS25-201ENST00000253794 TAS2R41P59536 307 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 CHRNB3Q05901 458 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 RBPJQ06330 500 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 ST3GAL3Q11203 375 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 PIN1Q13526 163 aaPredicted RBP12.7□□□□□ -0.38
VPS25-201ENST00000253794 SYT14P1Q58G82 188 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 GDF7Q7Z4P5 450 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 CYP4Z1Q86W10 505 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 ZDHHC21Q8IVQ6 265 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 OR6S1Q8NH40 331 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 ZPLD1Q8TCW7 415 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 KLHL15Q96M94 604 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 UCN2Q96RP3 112 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 ZNF347Q96SE7 839 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 POTEKPQ9BYX7 375 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 SLC19A3Q9BZV2 496 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 MAN2C1Q9NTJ4 1040 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 HDGFL3Q9Y3E1 203 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 V9GYQ6 96 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 DNAJC13O75165 2243 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 FREM3P0C091 2139 aa12.7□□□□□ -0.38
VPS25-201ENST00000253794 A0A1W2PRQ8 180 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 TMEM72A0PK05 275 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 H3BML4 177 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 J3KTA2 159 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 DNPH1O43598 174 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 SLC19A2O60779 497 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 WDR1O75083 606 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 HOXD4P09016 255 aaPredicted RBP12.69□□□□□ -0.38
VPS25-201ENST00000253794 TCEA1P23193 301 aaKnown RBP12.69□□□□□ -0.38
VPS25-201ENST00000253794 PTGER4P35408 488 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 STARP49675 285 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 CLDN20P56880 219 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 EGR4Q05215 589 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 C19orf57Q0VDD7 668 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 DGCR6Q14129 220 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 GK3PQ14409 553 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 WLSQ5T9L3 541 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 WDR88Q6ZMY6 472 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 SLCO4A1Q96BD0 722 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 DDIT4LQ96D03 193 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 SEPHS2Q99611 448 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 FUZQ9BT04 418 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 COQ10BQ9H8M1 238 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
VPS25-201ENST00000253794 ARMC1Q9NVT9 282 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 PAQR5Q9NXK6 330 aaPredicted RBP12.69□□□□□ -0.38
VPS25-201ENST00000253794 SELENONQ9NZV5 590 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 TRAPPC4Q9Y296 219 aa12.69□□□□□ -0.38
VPS25-201ENST00000253794 FAM32AQ9Y421 112 aaKnown RBP12.69□□□□□ -0.38
VPS25-201ENST00000253794 A0A0J9YW62 118 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 ELOA3DA6NLF2 546 aaPredicted RBP12.68□□□□□ -0.38
VPS25-201ENST00000253794 AHRRA9YTQ3 701 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 NPIPA2E9PIF3 369 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 NPIPA3F8WFD2 350 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 hCG_2039718K7EN88 272 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 RRP9O43818 475 aaKnown RBP12.68□□□□□ -0.38
VPS25-201ENST00000253794 STSP08842 583 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 GABRA1P14867 456 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 ABOP16442 354 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 SHC1P29353 583 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 SLC7A1P30825 629 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 SUCLG1P53597 346 aaKnown RBP12.68□□□□□ -0.38
VPS25-201ENST00000253794 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.386e-21■■■■■ 46.2
VPS25-201ENST00000253794 ELOA3BQ3SY89 546 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 GXYLT1Q4G148 440 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 TMPPEQ6ZT21 453 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 PRICKLE2Q7Z3G6 844 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 ELOA3Q8NG57 546 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 OR2V1Q8NHB1 315 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 HS6ST2Q96MM7 605 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 FNDC11Q9BVV2 318 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 CHID1Q9BWS9 393 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 DENND2DQ9H6A0 471 aaPredicted RBP12.68□□□□□ -0.38
VPS25-201ENST00000253794 YY1AP1Q9H869 796 aa12.68□□□□□ -0.38
VPS25-201ENST00000253794 RALYQ9UKM9 306 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms