RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CTPS2Q9NRF8 586 aa16.5■□□□□ 0.23
SHKBP1-202ENST00000593764 RLIMQ9NVW2 624 aa16.5■□□□□ 0.23
SHKBP1-202ENST00000593764 THUMPD1Q9NXG2 353 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-202ENST00000593764 ELOVL5Q9NYP7 299 aa16.5■□□□□ 0.23
SHKBP1-202ENST00000593764 CALML5Q9NZT1 146 aa16.5■□□□□ 0.23
SHKBP1-202ENST00000593764 TRBV5-3A0A0A0MS03 114 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 SH3D21A4FU49 640 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 KLK2P20151 261 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 AGTR1P30556 359 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 SLC7A1P30825 629 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 CCKARP32238 428 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 UGT2B10P36537 528 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 IDH2P48735 452 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 CRISP3P54108 245 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 RPS26P11Q5JNZ5 115 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 FCRLAQ7L513 359 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 GRINAQ7Z429 371 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 LSRQ86X29 649 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 C10orf111Q8N326 155 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 OR52P1PQ8NH57 321 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 WFIKKN1Q96NZ8 548 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 OR5B2Q96R09 309 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 SLC39A3Q9BRY0 314 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 CLEC4MQ9H2X3 399 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 SERINC1Q9NRX5 453 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 VAPAQ9P0L0 249 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 ING1Q9UK53 422 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 CHST2Q9Y4C5 530 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 GMEB1Q9Y692 573 aa16.49■□□□□ 0.23
SHKBP1-202ENST00000593764 IGHV3-15A0A0B4J1V0 119 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 A0A0G2JPF8 293 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 A0A1W2PP18 115 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 CDHR4A6H8M9 788 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 HNRNPCL2B2RXH8 293 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 HNRNPCL3B7ZW38 293 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 FAAHO00519 579 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 HNRNPCL1O60812 293 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 PABPC4LP0CB38 370 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 HNRNPCL4P0DMR1 293 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 POU2F1P14859 743 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 NCF2P19878 526 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 EPS8Q12929 822 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 FADDQ13158 208 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 GNA13Q14344 377 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 RNPS1Q15287 305 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 SYT14P1Q58G82 188 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 DLEU7Q6UYE1 221 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 TMPPEQ6ZT21 453 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 C22orf34Q6ZV56 151 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 CDC20BQ86Y33 519 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 TUSC5Q8IXB3 177 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 MAL2Q969L2 176 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 RSPO3Q9BXY4 272 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 LIME1Q9H400 295 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 A4GALTQ9NPC4 353 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 CHRNA9Q9UGM1 479 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 NDRG3Q9UGV2 375 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 TESMINQ9Y4I5 508 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 FREM1Q5H8C1 2179 aa16.48■□□□□ 0.23
SHKBP1-202ENST00000593764 CFAP73A6NFT4 308 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 C16orf97H3BN30 126 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 PRKD3O94806 890 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 ACAA2P42765 397 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 KCNJ5P48544 419 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 DIO1P49895 249 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 EXOC3L2Q2M3D2 409 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 LIN52Q52LA3 116 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 ZNF836Q6ZNA1 936 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 NUFIP2Q7Z417 695 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 SLC43A2Q8N370 569 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 CLIP4Q8N3C7 705 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 SLC25A43Q8WUT9 341 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 ARL5BQ96KC2 179 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 SIKE1Q9BRV8 207 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 ADAM19Q9H013 955 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 RAD21L1Q9H4I0 556 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 RABEP2Q9H5N1 569 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 IKZF5Q9H5V7 419 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 GP6Q9HCN6 339 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 BCL2L10Q9HD36 194 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 KLHL13Q9P2N7 655 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 OSGIN1Q9UJX0 560 aa16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 ZNF443Q9Y2A4 671 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-202ENST00000593764 PRR14LQ5THK1 2151 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 A0A0G2JND7 137 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 SMAD9O15198 467 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 HRGP04196 525 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 THBS1P07996 1170 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 GKN3PP0CG01 181 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 DNAJA1P31689 397 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 SLC1A3P43003 542 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 HTR3AP46098 478 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 TESK1Q15569 626 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 RNF220Q5VTB9 566 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 PRAMEF8Q5VWM4 474 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 PRAMEF7Q5VXH5 474 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 PSD2Q9BQI7 771 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 OR11A1Q9GZK7 315 aa16.46■□□□□ 0.23
SHKBP1-202ENST00000593764 C12orf49Q9H741 205 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms