RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 Q71RC1 249 aaPredicted RBP13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 BHLHA15Q7RTS1 189 aaPredicted RBP13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 RNF130Q86XS8 419 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 ARFGAP2Q8N6H7 521 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 ZHX1-C8orf76Q96EF9 292 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 CCDC115Q96NT0 180 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 PANX1Q96RD7 426 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 PSD2Q9BQI7 771 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 SAP130Q9H0E3 1048 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 CXorf56Q9H5V9 222 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
CCNDBP1-213ENST00000568507 TRPC5OSA6NMA1 111 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 H7C1Q1 480 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 FESP07332 822 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 CD3EP07766 207 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 FKBP2P26885 142 aaKnown RBP13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 OR3A2P47893 321 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 PTH2RP49190 550 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 KCNJ10P78508 379 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 LRRC74AQ0VAA2 488 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 ATG16L1Q676U5 607 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 NXNQ6DKJ4 435 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 FRRS1Q6ZNA5 592 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 Q6ZT83 130 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 GALNT5Q7Z7M9 940 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 ZNF100Q8IYN0 542 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 ZNF611Q8N823 705 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 MGARPQ8TDB4 240 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 AKAP1Q92667 903 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 ZG16BQ96DA0 208 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 TEX37Q96LM6 180 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 OR52E6Q96RD3 313 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 TMEM204Q9BSN7 226 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 GSX2Q9BZM3 304 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 CTPS2Q9NRF8 586 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 AIG1Q9NVV5 245 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 LIPT1Q9Y234 373 aa13.28□□□□□ -0.28
CCNDBP1-213ENST00000568507 GOLGA8QA0A0J9YX86 632 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 TMEM120BA0PK00 339 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 GOLGA8OA6NCC3 632 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 ZNF724A8MTY0 619 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 ZNF814B7Z6K7 855 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 GOLGA8NF8WBI6 632 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 HMGN4O00479 90 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 SDHDO14521 159 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 SMAD9O15198 467 aaKnown RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 HDAC3O15379 428 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 CLOCKO15516 846 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 TMCC2O75069 709 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 PGRP06401 933 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 ALDOCP09972 364 aaKnown RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 KITP10721 976 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 EPHA3P29320 983 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 TXNL4AP83876 142 aaKnown RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 GNA13Q14344 377 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 TAB1Q15750 504 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 AP1ARQ63HQ0 302 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 GRINAQ7Z429 371 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 HMGN2P46Q86SG4 172 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 MTDHQ86UE4 582 aaKnown RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 TRNT1Q96Q11 434 aaKnown RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 ZNF300Q96RE9 604 aaPredicted RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 WDR55Q9H6Y2 383 aaPredicted RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 EXOSC3Q9NQT5 275 aaKnown RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 EMC3Q9P0I2 261 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 CHRNA9Q9UGM1 479 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 PRSS50Q9UI38 385 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 ING1Q9UK53 422 aaPredicted RBP13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 RNF115Q9Y4L5 304 aa13.27□□□□□ -0.29
CCNDBP1-213ENST00000568507 PRAMEF27A3QJZ7 478 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 SMAD7O15105 426 aaKnown RBP13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 LYZL6O75951 148 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 KRT75O95678 551 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 GSNP06396 782 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 CCNA2P20248 432 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 HTR3AP46098 478 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 IDH2P48735 452 aaKnown RBP13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 CLK1P49759 484 aaKnown RBP13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 FUT5Q11128 374 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 STK11Q15831 433 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 SYPL1Q16563 259 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 NCMAPQ5T1S8 102 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 LRRC74BQ6ZQY2 392 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 ANKFN1Q8N957 763 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 GLB1L3Q8NCI6 653 aaPredicted RBP13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 RAB3IL1Q8TBN0 382 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 INPP5KQ9BT40 448 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 CCDC106Q9BWC9 280 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 POTEKPQ9BYX7 375 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 MTHFD2LQ9H903 347 aaPredicted RBP13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 NKIRAS1Q9NYS0 192 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 LAMP3Q9UQV4 416 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 HDGFL3Q9Y3E1 203 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 GPR45Q9Y5Y3 372 aa13.26□□□□□ -0.29
CCNDBP1-213ENST00000568507 NUP214P35658 2090 aaPredicted RBP13.25□□□□□ -0.29
CCNDBP1-213ENST00000568507 TRIM64A6NGJ6 449 aa13.25□□□□□ -0.29
CCNDBP1-213ENST00000568507 TRIM64BA6NI03 449 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms