RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 CENPMQ9NSP4 180 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 QPCTLQ9NXS2 382 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 A8MUA0 341 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 NPIPA7E9PJI5 369 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SIGLEC6O43699 453 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 RPP14O95059 124 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SLC34A2O95436 690 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 NPIPA8P0DM63 369 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 MAN2A2P49641 1150 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ERVFC1P60507 584 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 RPS24P62847 133 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 RBMS2Q15434 407 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 GPR19Q15760 415 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PGGHGQ32M88 737 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM52BQ4KMG9 183 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 DCST2Q5T1A1 773 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 UBE2UQ5VVX9 321 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PIWIL3Q7Z3Z3 882 aaKnown RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 RDH10Q8IZV5 341 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 METTL4Q8N3J2 472 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 BCORP1Q8N888 145 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 OR4E2Q8NGC2 313 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KCNA7Q96RP8 456 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KCNJ15Q99712 375 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SLC30A3Q99726 388 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CUEDC1Q9NWM3 386 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 GPR83Q9NYM4 423 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KCNK6Q9Y257 313 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ZNF281Q9Y2X9 895 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SLC9B1P1A6NJY1 282 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ADAM10O14672 748 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ARAFP10398 606 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 VAMP1P23763 118 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PLA2G5P39877 138 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 DLX5P56178 289 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CDC20Q12834 499 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 DNASE1L3Q13609 305 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 AGAP6Q5VW22 663 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 DHRS4L2Q6PKH6 230 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM107Q6UX40 140 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ALKAL1Q6UXT8 129 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KLBQ86Z14 1044 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SLC15A4Q8N697 577 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 OR56B4Q8NH76 319 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 NANPQ8TBE9 248 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 SLC39A7Q92504 469 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TXNDC15Q96J42 360 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TECTBQ96PL2 329 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 TREX2Q9BQ50 279 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 CPPED1Q9BRF8 314 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 THAP7Q9BT49 309 aaPredicted RBP7.32□□□□□ -1.24
VPS13D-211ENST00000543710 MED18Q9BUE0 208 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 PRDM9Q9NQV7 894 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 LUZP4Q9P127 313 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 ATG4BQ9Y4P1 393 aa7.32□□□□□ -1.24
VPS13D-211ENST00000543710 KIAA1551Q9HCM1 1747 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 SERTM1A2A2V5 107 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 TFP02787 698 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 DCTP40126 519 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 CDKN1CP49918 316 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 NKX6-1P78426 367 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 CCDC58Q4VC31 144 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 NXNL2Q5VZ03 156 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 TXNRD3NBQ6F5E7 133 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 DHRS13Q6UX07 377 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 MBOAT2Q6ZWT7 520 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 KRTCAP2Q8N6L1 136 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 EXD3Q8N9H8 876 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM246Q9BRR3 403 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 GPR62Q9BZJ7 368 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 EIF5A2Q9GZV4 153 aaKnown RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 CHRDQ9H2X0 955 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 TCEAL2Q9H3H9 227 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 FKRPQ9H9S5 495 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 SLC7A7Q9UM01 511 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 SLC5A6Q9Y289 635 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 KLF13Q9Y2Y9 288 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 ITGB4P16144 1822 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 BLOC1S5-TXNDC5H3BN57 136 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 WNT11O96014 354 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 POLR2CP19387 275 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 WDR5BQ86VZ2 330 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 FAM109AQ8N4B1 249 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 ARFGAP1Q8N6T3 406 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 OLIG1Q8TAK6 271 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM239Q8WW34 195 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 INTS14Q96SY0 518 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 UBE2J1Q9Y385 318 aaPredicted RBP7.31□□□□□ -1.24
VPS13D-211ENST00000543710 ZNF175Q9Y473 711 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 PAPPA2Q9BXP8 1791 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 AGAP14A8MT82 685 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 SYT7O43581 403 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 SCRG1O75711 98 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 OPN1SWP03999 348 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 CEACAM1P13688 526 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 CRHBPP24387 322 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 APLNRP35414 380 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 ACVR1BP36896 505 aa7.31□□□□□ -1.24
VPS13D-211ENST00000543710 RPL34P49207 117 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms