RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CALHM2Q9HA72 323 aa0.91□□□□□ -2.26
CCDC93-209ENST00000488908 MID1IP1Q9NPA3 183 aa0.91□□□□□ -2.26
CCDC93-209ENST00000488908 B3GNT2Q9NY97 397 aa0.91□□□□□ -2.26
CCDC93-209ENST00000488908 MRPL39Q9NYK5 338 aaKnown RBP0.91□□□□□ -2.26
CCDC93-209ENST00000488908 CYP39A1Q9NYL5 469 aa0.91□□□□□ -2.26
CCDC93-209ENST00000488908 TREM2Q9NZC2 230 aa0.91□□□□□ -2.26
CCDC93-209ENST00000488908 WRAP73Q9P2S5 460 aaPredicted RBP0.91□□□□□ -2.26
CCDC93-209ENST00000488908 DNPEPQ9ULA0 475 aa0.91□□□□□ -2.26
CCDC93-209ENST00000488908 DHX29Q7Z478 1369 aaKnown RBP0.91□□□□□ -2.26
CCDC93-209ENST00000488908 MAP3K15Q6ZN16 1313 aa0.9□□□□□ -2.26
CCDC93-209ENST00000488908 PDS5BQ9NTI5 1447 aa0.9□□□□□ -2.26
CCDC93-209ENST00000488908 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 RNF222A6NCQ9 220 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 C11orf94C9JXX5 98 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 E7ESA3 106 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 SSX5O60225 188 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 OR10H3O60404 316 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 JAK2O60674 1132 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 RCBTB2O95199 551 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 P04436 131 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 GIPP09681 153 aaPredicted RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 RHOXF2BP0C7M4 288 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 ALPPL2P10696 532 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 ICAM2P13598 275 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 XRCC1P18887 633 aaPredicted RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 UQCRC2P22695 453 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 SELENOTP62341 195 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 CNTN2Q02246 1040 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 EXOSC2Q13868 293 aaKnown RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 LAGE3Q14657 143 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 ATXN7L3Q14CW9 347 aaPredicted RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 PRSS8Q16651 343 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 NRF1Q16656 503 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 CCDC57Q2TAC2 916 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 ADPRMQ3LIE5 342 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 CCDC40Q4G0X9 1142 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM255AQ5JRV8 349 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 C11orf71Q6IPW1 123 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 CYS1Q717R9 158 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 GDPD3Q7L5L3 318 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 APTXQ7Z2E3 356 aaKnown RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 NEGR1Q7Z3B1 354 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 CNTN4Q8IWV2 1026 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 EFCAB13Q8IY85 973 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 GIPC3Q8TF64 312 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 TCTEX1D2Q8WW35 142 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 SNX21Q969T3 373 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 VMP1Q96GC9 406 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 CELF6Q96J87 481 aaKnown RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 PGLYRP4Q96LB8 373 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 NSMCE2Q96MF7 247 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 HDHD3Q9BSH5 251 aaPredicted RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 SELENOIQ9C0D9 397 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 UTP6Q9NYH9 597 aaKnown RBP0.9□□□□□ -2.27
CCDC93-209ENST00000488908 AIPL1Q9NZN9 384 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 OARD1Q9Y530 152 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 AP4B1Q9Y6B7 739 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 SPACA6W5XKT8 324 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 DOCK9Q9BZ29 2069 aa0.9□□□□□ -2.27
CCDC93-209ENST00000488908 A0A1B0GUL7 405 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 FAM74A7A6NL05 159 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 H3BMQ9 156 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 B4GALT5O43286 388 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 KINO60870 393 aaKnown RBP0.89□□□□□ -2.27
CCDC93-209ENST00000488908 HMOX1P09601 288 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 CISD3P0C7P0 127 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 POU2F1P14859 743 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 PAICSP22234 425 aaKnown RBP0.89□□□□□ -2.27
CCDC93-209ENST00000488908 CALB2P22676 271 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 OTX2P32243 289 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 CD80P33681 288 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 ASMTP46597 345 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 KPNA2P52292 529 aaKnown RBP0.89□□□□□ -2.27
CCDC93-209ENST00000488908 RIPK1Q13546 671 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 PDIA5Q14554 519 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 FAM74A3Q4VXF1 159 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 LY6G6FQ5SQ64 297 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 C1orf100Q5SVJ3 147 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 TMED8Q6PL24 325 aaPredicted RBP0.89□□□□□ -2.27
CCDC93-209ENST00000488908 UNC5DQ6UXZ4 953 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 LANCL3Q6ZV70 420 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 C16orf62Q7Z3J2 963 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM17Q86X19 198 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 C12orf56Q8IXR9 622 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 GCNT2Q8N0V5 402 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 SVOPLQ8N434 492 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 SPC24Q8NBT2 197 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 CCNYQ8ND76 341 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 NPBQ8NG41 125 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 OR5AU1Q8NGC0 362 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 URGCPQ8TCY9 931 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 GIMAP1Q8WWP7 306 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 TMEM158Q8WZ71 300 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 RAB7BQ96AH8 199 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 RPUSD4Q96CM3 377 aaKnown RBP0.89□□□□□ -2.27
CCDC93-209ENST00000488908 VSTM2LQ96N03 204 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 GAL3ST1Q99999 423 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 KLHDC3Q9BQ90 382 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 DESI2Q9BSY9 194 aa0.89□□□□□ -2.27
CCDC93-209ENST00000488908 TBCDQ9BTW9 1192 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms