RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NPIPB8E9PQR5 432 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 G3V2L1 256 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 PGRP06401 933 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 KRT16P08779 473 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 NR4A2P43354 598 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 ASMTP46597 345 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 FOXG1P55316 489 aaPredicted RBP15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 SESN3P58005 492 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 PDE7AQ13946 482 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 GPR68Q15743 365 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 GABRA6Q16445 453 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 EXOSC6Q5RKV6 272 aaKnown RBP15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 C17orf53Q8N3J3 647 aaPredicted RBP15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 OR7A2PQ8NGA2 310 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 OR2T11Q8NH01 316 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 ACMSDQ8TDX5 336 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 TMEM234Q8WY98 164 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 MTERF3Q96E29 417 aa15.81■□□□□ 0.12
CHCHD3-203ENST00000448878 SERINC4A6NH21 518 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 GPR171O14626 319 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 CFLARO15519 480 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 CHEK2O96017 543 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 HPCAL1P37235 193 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 PHC1P78364 1004 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 SYT14P1Q58G82 188 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 DDIASQ8IXT1 998 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 OR56A1Q8NGH5 318 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 OR52E4Q8NGH9 312 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 ZNF563Q8TA94 476 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 MUS81Q96NY9 551 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 OR7D2Q96RA2 312 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 EMCNQ9ULC0 261 aa15.8■□□□□ 0.12
CHCHD3-203ENST00000448878 IGHV4-61A0A0C4DH41 118 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 ESPNB1AK53 854 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 VWC2LB2RUY7 222 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 ATP6V1G2-DDX39BF2Z307 99 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 NDUFS8O00217 210 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 AZIN1O14977 448 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 TCF21O43680 179 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 GLRA3O75311 464 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 CSTAP01040 98 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 UBTFL6P0CB48 400 aaPredicted RBP15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 NEFHP12036 1026 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 PGCP20142 388 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 SRP14P37108 136 aaKnown RBP15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 OR2B6P58173 313 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 CR1LQ2VPA4 569 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 LIPMQ5VYY2 423 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 ABLIM2Q6H8Q1 611 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 CASP12Q6UXS9 341 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 C12orf54Q6X4T0 127 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 SLC46A3Q7Z3Q1 461 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 CCDC103Q8IW40 242 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 OR5D16Q8NGK9 328 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 OR5AK3PQ8NH89 298 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 PIGXQ8TBF5 258 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 ST8SIA1Q92185 356 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 SORCS2Q96PQ0 1159 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 LAT2Q9GZY6 243 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 MOKQ9UQ07 419 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 TMED5Q9Y3A6 229 aa15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 SPIN1Q9Y657 262 aaPredicted RBP15.79■□□□□ 0.12
CHCHD3-203ENST00000448878 IGKV3D-15A0A087WSY6 115 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 A0A1W2PPM1 405 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 ZNF716A6NP11 495 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 SCAMP2O15127 329 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 URI1O94763 535 aaPredicted RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 C6orf47O95873 294 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 ITGA5P08648 1049 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 LAMP1P11279 417 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 BCKDHAP12694 445 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 CDH2P19022 906 aaPredicted RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 CCNA2P20248 432 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 SOAT1P35610 550 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 MAGEA8P43361 318 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 SNRPD2P62316 118 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 PDK3Q15120 406 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 LSM12Q3MHD2 195 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 KLHL24Q6TFL4 600 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 ANKS4BQ8N8V4 417 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 WDR31Q8NA23 367 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 SLC25A43Q8WUT9 341 aaPredicted RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 OR5P2Q8WZ92 322 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 C1orf159Q96HA4 380 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 FCRL1Q96LA6 429 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 SDF2Q99470 211 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 PSMC3IPQ9P2W1 217 aaPredicted RBP15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 ATP6V1HQ9UI12 483 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 AMDHD2Q9Y303 409 aa15.78■□□□□ 0.12
CHCHD3-203ENST00000448878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.78■□□□□ 0.125e-6■■■■□ 22.8
CHCHD3-203ENST00000448878 LOC390937A0A1W2PQ73 354 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 TMEM114B3SHH9 223 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 NPIPB9F8W1W9 429 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 LSM1O15116 133 aaKnown RBP15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 SKAP2O75563 359 aaPredicted RBP15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 PROCP04070 461 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 CPA3P15088 417 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 ECHS1P30084 290 aa15.77■□□□□ 0.12
CHCHD3-203ENST00000448878 NTF4P34130 210 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms