RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 MAPK11Q15759 364 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 NXNQ6DKJ4 435 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 TMPPEQ6ZT21 453 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 WFDC8Q8IUA0 241 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 RAB3IL1Q8TBN0 382 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 PNPT1Q8TCS8 783 aaKnown RBP16.4■□□□□ 0.22
NUP50-207ENST00000424634 TMEM234Q8WY98 164 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 CNOT9Q92600 299 aaKnown RBP16.4■□□□□ 0.22
NUP50-207ENST00000424634 S100PBPQ96BU1 408 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 TRNT1Q96Q11 434 aaKnown RBP16.4■□□□□ 0.22
NUP50-207ENST00000424634 OR52B2Q96RD2 323 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 PIP5K1AQ99755 562 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 OR10A4Q9H209 315 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 CTPS2Q9NRF8 586 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.4■□□□□ 0.22
NUP50-207ENST00000424634 NKIRAS1Q9NYS0 192 aa16.4■□□□□ 0.22
NUP50-207ENST00000424634 SLCO1B7G3V0H7 640 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 CYTIPO60759 359 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 DIO1P49895 249 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 RASGEF1BQ0VAM2 473 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 PDCD4Q53EL6 469 aaKnown RBP16.39■□□□□ 0.21
NUP50-207ENST00000424634 BEX5Q5H9J7 111 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 SFRP5Q5T4F7 317 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 ADGRG3Q86Y34 549 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 GLB1L3Q8NCI6 653 aaPredicted RBP16.39■□□□□ 0.21
NUP50-207ENST00000424634 ARL8AQ96BM9 186 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 ZNF300Q96RE9 604 aaPredicted RBP16.39■□□□□ 0.21
NUP50-207ENST00000424634 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 FANCFQ9NPI8 374 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 SERINC1Q9NRX5 453 aa16.39■□□□□ 0.21
NUP50-207ENST00000424634 AGAP5A6NIR3 686 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 AP3D1O14617 1153 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 ERLIN1O75477 346 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 SLC22A3O75751 556 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 ADAP00813 363 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 IDO1P14902 403 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 FOSL1P15407 271 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 FPR1P21462 350 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 APOBEC1P41238 236 aaKnown RBP16.38■□□□□ 0.21
NUP50-207ENST00000424634 MVDP53602 400 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 SYT14P1Q58G82 188 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 LRRC74BQ6ZQY2 392 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 ARFGAP2Q8N6H7 521 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 STEAP2Q8NFT2 490 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 ZNF563Q8TA94 476 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 IGFBPL1Q8WX77 278 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 PIGTQ969N2 578 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 DNAJA3Q96EY1 480 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 PLPPR2Q96GM1 343 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 ARL5BQ96KC2 179 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 HDHD5Q9BXW7 423 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 EXOSC3Q9NQT5 275 aaKnown RBP16.38■□□□□ 0.21
NUP50-207ENST00000424634 KLHL9Q9P2J3 617 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 PRSS50Q9UI38 385 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 LIPT1Q9Y234 373 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 CADP27708 2225 aa16.38■□□□□ 0.21
NUP50-207ENST00000424634 USF3Q68DE3 2245 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 SULT2B1O00204 365 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 RFXANKO14593 260 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 SMPD2O60906 423 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 IL6P05231 212 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 FESP07332 822 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 OR3A2P47893 321 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 IDH2P48735 452 aaKnown RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 HPCAP84074 193 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 LRRC74AQ0VAA2 488 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 ALKBH2Q6NS38 261 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 ZNF704Q6ZNC4 412 aaPredicted RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 GRINAQ7Z429 371 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 PIWIL2Q8TC59 973 aaKnown RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 CCL19Q99731 98 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 TMEM204Q9BSN7 226 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 OR11A1Q9GZK7 315 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 MTHFD2LQ9H903 347 aaPredicted RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 SDR39U1Q9NRG7 319 aaPredicted RBP16.37■□□□□ 0.21
NUP50-207ENST00000424634 CHRNA9Q9UGM1 479 aa16.37■□□□□ 0.21
NUP50-207ENST00000424634 ZNF724A8MTY0 619 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 KLF11O14901 512 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 NR2F1P10589 423 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 TFPIP10646 304 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 TXNL4AP83876 142 aaKnown RBP16.36■□□□□ 0.21
NUP50-207ENST00000424634 TAB1Q15750 504 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 GSTA3Q16772 222 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 GTDC1Q4AE62 458 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 SHEQ5VZ18 495 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 DNAJC14Q6Y2X3 702 aaPredicted RBP16.36■□□□□ 0.21
NUP50-207ENST00000424634 C20orf204Q6ZNR8 217 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 MTDHQ86UE4 582 aaKnown RBP16.36■□□□□ 0.21
NUP50-207ENST00000424634 LRRC75A-AS1Q8N1F1 130 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 OR9I1Q8NGQ6 314 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 SLC25A43Q8WUT9 341 aaPredicted RBP16.36■□□□□ 0.21
NUP50-207ENST00000424634 SMR3AQ99954 134 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
NUP50-207ENST00000424634 ZIM2Q9NZV7 527 aa16.36■□□□□ 0.21
NUP50-207ENST00000424634 UBDO15205 165 aa16.35■□□□□ 0.21
NUP50-207ENST00000424634 KRT75O95678 551 aa16.35■□□□□ 0.21
NUP50-207ENST00000424634 ETFAP13804 333 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms