RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CLPXO76031 633 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 GP1BAP07359 652 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 HTR1FP30939 366 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 FOXK2Q01167 660 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 SLC35F1Q5T1Q4 408 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 TCEAL6Q6IPX3 200 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 GID4Q8IVV7 300 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 TCEAL3Q969E4 200 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 OTULINQ96BN8 352 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 SPSB2Q99619 263 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 CRB3Q9BUF7 120 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 MCCC2Q9HCC0 563 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 EXOSC1Q9Y3B2 195 aaKnown RBP17.35■□□□□ 0.37
USP39-202ENST00000409025 HTR3EA5X5Y0 456 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 SCG5P05408 212 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 ETV5P41161 510 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 SLC9A3P48764 834 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 ETV1P50549 477 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 DGUOKQ16854 277 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 LCN10Q6JVE6 187 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 PAPD4Q6PIY7 484 aaKnown RBP17.35■□□□□ 0.37
USP39-202ENST00000409025 ATG4DQ86TL0 474 aaPredicted RBP17.35■□□□□ 0.37
USP39-202ENST00000409025 MARCH3Q86UD3 253 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 SLCO6A1Q86UG4 719 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 BMPERQ8N8U9 685 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 APCDD1LQ8NCL9 501 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 ZNF563Q8TA94 476 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 ZHX1-C8orf76Q96EF9 292 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 VMP1Q96GC9 406 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 LOXL4Q96JB6 756 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 OPALINQ96PE5 141 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 LPAR4Q99677 370 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 CMC2Q9NRP2 79 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 RXFP3Q9NSD7 469 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 C19orf25Q9UFG5 118 aaPredicted RBP17.35■□□□□ 0.37
USP39-202ENST00000409025 PPIEQ9UNP9 301 aaKnown RBP17.35■□□□□ 0.37
USP39-202ENST00000409025 PCDHGB2Q9Y5G2 931 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 HCRTR2O43614 444 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 FOXD2O60548 495 aaPredicted RBP17.34■□□□□ 0.37
USP39-202ENST00000409025 EIF4E2O60573 245 aaKnown RBP17.34■□□□□ 0.37
USP39-202ENST00000409025 APOL3O95236 402 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 CYC1P08574 325 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 ACP1P24666 158 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 ZNF117Q03924 483 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP39-202ENST00000409025 TIMM50Q3ZCQ8 353 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 PLBD1Q6P4A8 553 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 PAQR6Q6TCH4 344 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 CPEB2Q7Z5Q1 589 aaKnown RBP17.34■□□□□ 0.37
USP39-202ENST00000409025 BBS1Q8NFJ9 593 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 SH3YL1Q96HL8 342 aaPredicted RBP17.34■□□□□ 0.37
USP39-202ENST00000409025 TAPBPLQ9BX59 468 aa17.34■□□□□ 0.37
USP39-202ENST00000409025 OR6C70A6NIJ9 312 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 FAM183AA6NL82 134 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 RIIAD1A6NNX1 92 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 NDUFB2O95178 105 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 PPP1R3DO95685 299 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 SERPINB10P48595 397 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 MC2RQ01718 297 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 FHL1Q13642 323 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 MRPL14Q6P1L8 145 aaKnown RBP17.33■□□□□ 0.37
USP39-202ENST00000409025 DBX2Q6ZNG2 339 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 NUBPLQ8TB37 319 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 DYNC2LI1Q8TCX1 351 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 RHBDD1Q8TEB9 315 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 MESP1Q9BRJ9 268 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 TMEM43Q9BTV4 400 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 RTN4RQ9BZR6 473 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 OR51E2Q9H255 320 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 GPN3Q9UHW5 284 aaPredicted RBP17.33■□□□□ 0.37
USP39-202ENST00000409025 EXOGQ9Y2C4 368 aaKnown RBP17.33■□□□□ 0.37
USP39-202ENST00000409025 ZNF337Q9Y3M9 751 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 PCDHGA5Q9Y5G8 931 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 PCDHGA3Q9Y5H0 932 aa17.33■□□□□ 0.37
USP39-202ENST00000409025 SOCS6O14544 535 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 GDF9O60383 454 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 OR7A10O76100 309 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 IGF2P01344 180 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 KLK3P07288 261 aaPredicted RBP17.33■□□□□ 0.36
USP39-202ENST00000409025 HK1P19367 917 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 NOS3P29474 1203 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 AVPR2P30518 371 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 UGT2B10P36537 528 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 SLC1A3P43003 542 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 MLLT11Q13015 90 aaPredicted RBP17.33■□□□□ 0.36
USP39-202ENST00000409025 DCTN2Q13561 401 aaKnown RBP17.33■□□□□ 0.36
USP39-202ENST00000409025 MOGQ16653 247 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 ARHGAP11AQ6P4F7 1023 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 C19orf48Q6RUI8 117 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 TMEM205Q6UW68 189 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 NACC2Q96BF6 587 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 WDR77Q9BQA1 342 aaPredicted RBP17.33■□□□□ 0.36
USP39-202ENST00000409025 C12orf10Q9HB07 376 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 ZBTB20Q9HC78 741 aaPredicted RBP17.33■□□□□ 0.36
USP39-202ENST00000409025 FBXO8Q9NRD0 319 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 NXT1Q9UKK6 140 aaKnown RBP17.33■□□□□ 0.36
USP39-202ENST00000409025 NPFFR2Q9Y5X5 522 aa17.33■□□□□ 0.36
USP39-202ENST00000409025 IGKV1D-42A0A075B6H8 117 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 LOC100506127A0A0U1RQW1 187 aa17.32■□□□□ 0.36
USP39-202ENST00000409025 TMEM129A0AVI4 362 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms