RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 OR3A2P47893 321 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 SLC18A1P54219 525 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 PDK3Q15120 406 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 TYW3Q6IPR3 259 aaKnown RBP15.77■□□□□ 0.12
CMTM1-204ENST00000336328 Q6ZT83 130 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 GALNT5Q7Z7M9 940 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 MTDHQ86UE4 582 aaKnown RBP15.77■□□□□ 0.12
CMTM1-204ENST00000336328 ARFGAP2Q8N6H7 521 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 S100PBPQ96BU1 408 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 TRNT1Q96Q11 434 aaKnown RBP15.77■□□□□ 0.12
CMTM1-204ENST00000336328 OR52E6Q96RD3 313 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 PSD2Q9BQI7 771 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 TMEM204Q9BSN7 226 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 MTHFD2LQ9H903 347 aaPredicted RBP15.77■□□□□ 0.12
CMTM1-204ENST00000336328 EXOSC3Q9NQT5 275 aaKnown RBP15.77■□□□□ 0.12
CMTM1-204ENST00000336328 EMC3Q9P0I2 261 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 HDGFL3Q9Y3E1 203 aa15.77■□□□□ 0.12
CMTM1-204ENST00000336328 NF1P21359 2839 aa15.77■□□□□ 0.11
CMTM1-204ENST00000336328 PRR14LQ5THK1 2151 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 HS3ST1O14792 307 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 DNPH1O43598 174 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 KRT75O95678 551 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 PGRP06401 933 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 CD3EP07766 207 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 PAX1P15863 534 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 DIO1P49895 249 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 MAP2K6P52564 334 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 CASP9P55211 416 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 CAPRIN1Q14444 709 aaKnown RBP15.76■□□□□ 0.11
CMTM1-204ENST00000336328 SYT14P1Q58G82 188 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 ADAM5Q6NVV9 412 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 CLEC9AQ6UXN8 241 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 ZNF621Q6ZSS3 439 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 GRINAQ7Z429 371 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 YTHDF3Q7Z739 585 aaKnown RBP15.76■□□□□ 0.11
CMTM1-204ENST00000336328 P2RY8Q86VZ1 359 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 KRTAP1-3Q8IUG1 177 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 ZNF100Q8IYN0 542 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 ANKRD42Q8N9B4 389 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 FAM71CQ8NEG0 241 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 RAB3IL1Q8TBN0 382 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 MUCL1Q96DR8 90 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 PERPQ96FX8 193 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 QRSL1Q9H0R6 528 aaKnown RBP15.76■□□□□ 0.11
CMTM1-204ENST00000336328 AIG1Q9NVV5 245 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 CHRNA9Q9UGM1 479 aa15.76■□□□□ 0.11
CMTM1-204ENST00000336328 IGHV3-15A0A0B4J1V0 119 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 GPR171O14626 319 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 IL6P05231 212 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 UQCRBP14927 111 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 RYKP34925 604 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 UFM1P61960 85 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 MAPK14Q16539 360 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 ALKBH2Q6NS38 261 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 FRRS1Q6ZNA5 592 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 LRRC74BQ6ZQY2 392 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 BHLHA15Q7RTS1 189 aaPredicted RBP15.75■□□□□ 0.11
CMTM1-204ENST00000336328 NKIRAS1Q9NYS0 192 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 TRAPPC4Q9Y296 219 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 RNF115Q9Y4L5 304 aa15.75■□□□□ 0.11
CMTM1-204ENST00000336328 TMEM120BA0PK00 339 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 HMGN4O00479 90 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 SDHDO14521 159 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 SMAD9O15198 467 aaKnown RBP15.74■□□□□ 0.11
CMTM1-204ENST00000336328 ERLIN1O75477 346 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 H6PDO95479 791 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 PMS2P2O95744 297 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 IDO1P14902 403 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 IL7RP16871 459 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 CHRNEQ04844 493 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 LTBQ06643 244 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 TAB1Q15750 504 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 NCMAPQ5T1S8 102 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 RNF130Q86XS8 419 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 AKAP1Q92667 903 aaKnown RBP eCLIP15.74■□□□□ 0.11
CMTM1-204ENST00000336328 ZNF524Q96C55 264 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 TRMT61AQ96FX7 289 aaKnown RBP15.74■□□□□ 0.11
CMTM1-204ENST00000336328 Q96MF0 132 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 CCDC106Q9BWC9 280 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 POTEKPQ9BYX7 375 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 CTPS2Q9NRF8 586 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 CALML5Q9NZT1 146 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 GPR45Q9Y5Y3 372 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 RAI1Q7Z5J4 1906 aaPredicted RBP15.74■□□□□ 0.11
CMTM1-204ENST00000336328 USF3Q68DE3 2245 aa15.74■□□□□ 0.11
CMTM1-204ENST00000336328 IGKV3D-15A0A087WSY6 115 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 AGAP5A6NIR3 686 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 ZNF814B7Z6K7 855 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 EIF1BO60739 113 aaKnown RBP15.73■□□□□ 0.11
CMTM1-204ENST00000336328 ALDOCP09972 364 aaKnown RBP15.73■□□□□ 0.11
CMTM1-204ENST00000336328 NR2F1P10589 423 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 HOXB4P17483 251 aaPredicted RBP15.73■□□□□ 0.11
CMTM1-204ENST00000336328 EPHA3P29320 983 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 IDH2P48735 452 aaKnown RBP15.73■□□□□ 0.11
CMTM1-204ENST00000336328 PTH2RP49190 550 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 NME5P56597 212 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 ZSWIM7Q19AV6 140 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 NXNQ6DKJ4 435 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 PEX5LQ8IYB4 626 aa15.73■□□□□ 0.11
CMTM1-204ENST00000336328 ZNF440Q8IYI8 595 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms