RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 MAELQ96JY0 434 aaKnown RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 OR5B2Q96R09 309 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 ZBTB18Q99592 522 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 QRSL1Q9H0R6 528 aaKnown RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 WDR55Q9H6Y2 383 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 MTHFD2LQ9H903 347 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 UBTD1Q9HAC8 227 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 SPIN1Q9Y657 262 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 AGAP5A6NIR3 686 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 SMAD9O15198 467 aaKnown RBP15.76■□□□□ 0.11
HDDC3-201ENST00000330334 IDO1P14902 403 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 PAX1P15863 534 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 OR3A2P47893 321 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 DIO1P49895 249 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 HPCAP84074 193 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 CHRNEQ04844 493 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 RASGEF1BQ0VAM2 473 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 ITGADQ13349 1161 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 GPAT3Q53EU6 434 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 SYT14P1Q58G82 188 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 LRRC74BQ6ZQY2 392 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 Q6ZT83 130 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 GRINAQ7Z429 371 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 BIVMQ86UB2 503 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 MTDHQ86UE4 582 aaKnown RBP15.76■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF75CPQ92670 426 aaPredicted RBP15.76■□□□□ 0.11
HDDC3-201ENST00000330334 TLCD1Q96CP7 247 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 C18orf12Q96KH6 178 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 CCL19Q99731 98 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 MANSC1Q9H8J5 431 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 NGBQ9NPG2 151 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 NKIRAS1Q9NYS0 192 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 CHRNA9Q9UGM1 479 aa15.76■□□□□ 0.11
HDDC3-201ENST00000330334 IGKV3D-15A0A087WSY6 115 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF814B7Z6K7 855 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 FAAHO00519 579 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 KLF11O14901 512 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 DNPH1O43598 174 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 BCAS1O75363 584 aaPredicted RBP15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ERLIN1O75477 346 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 HTR3AP46098 478 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 MAP2K6P52564 334 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 NME5P56597 212 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 MAGOHP61326 146 aaKnown RBP15.75■□□□□ 0.11
HDDC3-201ENST00000330334 PDCD4Q53EL6 469 aaKnown RBP15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ADAM5Q6NVV9 412 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF704Q6ZNC4 412 aaPredicted RBP15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF621Q6ZSS3 439 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 SSX8Q7RTT4 187 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 P3H2Q8IVL5 708 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ARFGAP2Q8N6H7 521 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF563Q8TA94 476 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 S100PBPQ96BU1 408 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 PLPPR2Q96GM1 343 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 INPP5KQ9BT40 448 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 GSX2Q9BZM3 304 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 SLC38A1Q9H2H9 487 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 TMBIM4Q9HC24 238 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 HDGFL3Q9Y3E1 203 aa15.75■□□□□ 0.11
HDDC3-201ENST00000330334 IGHV3-15A0A0B4J1V0 119 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 GOLGA8QA0A0J9YX86 632 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 GOLGA8OA6NCC3 632 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 GOLGA8NF8WBI6 632 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 SULT2B1O00204 365 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 SLC22A3O75751 556 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 KRT75O95678 551 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 PMS2P2O95744 297 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ADAP00813 363 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ZCCHC18P0CG32 403 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 RPS4Y1P22090 263 aaKnown RBP15.74■□□□□ 0.11
HDDC3-201ENST00000330334 IL32P24001 234 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 CDKN2CP42773 168 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 PLAURQ03405 335 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 GNA13Q14344 377 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 SYPL1Q16563 259 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 GSTA3Q16772 222 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 BEND6Q5SZJ8 279 aaPredicted RBP15.74■□□□□ 0.11
HDDC3-201ENST00000330334 GALNT5Q7Z7M9 940 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ADGRG3Q86Y34 549 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 WFDC8Q8IUA0 241 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ZNF611Q8N823 705 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ANKFN1Q8N957 763 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 KISS1RQ969F8 398 aaPredicted RBP15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ZBTB9Q96C00 473 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 CTPS2Q9NRF8 586 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 SDR39U1Q9NRG7 319 aaPredicted RBP15.74■□□□□ 0.11
HDDC3-201ENST00000330334 ZIM2Q9NZV7 527 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 TRAPPC4Q9Y296 219 aa15.74■□□□□ 0.11
HDDC3-201ENST00000330334 RFXANKO14593 260 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 HS3ST1O14792 307 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 C1QCP02747 245 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 CHRM4P08173 479 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 KITP10721 976 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 RYKP34925 604 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 TAB1Q15750 504 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 Q5PR19 223 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 ABLIM2Q6H8Q1 611 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 MSANTD1Q6ZTZ1 278 aa15.73■□□□□ 0.11
HDDC3-201ENST00000330334 PIWIL2Q8TC59 973 aaKnown RBP15.73■□□□□ 0.11
HDDC3-201ENST00000330334 MGARPQ8TDB4 240 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms