RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 NXPE2Q96DL1 559 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 ZFP3Q96NJ6 502 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
CCT3-201ENST00000295688 BRD7Q9NPI1 651 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 PLEKHM1Q9Y4G2 1056 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 SNRNP200O75643 2136 aaKnown RBP13.71□□□□□ -0.21
CCT3-201ENST00000295688 A0A1B0GTQ1 180 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 GPR171O14626 319 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 ZNF749O43361 778 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 PRAF2O60831 178 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 IFI6P09912 130 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 OR2T7P0C7T2 308 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 SMIM10L1P0DMW3 83 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 C4BPBP20851 252 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 PTNP21246 168 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 NT5EP21589 574 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 DNASE1P24855 282 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 NOS3P29474 1203 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 RPS21P63220 83 aaKnown RBP13.71□□□□□ -0.22
CCT3-201ENST00000295688 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.22
CCT3-201ENST00000295688 CRMP1Q14194 572 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 MFSD13AQ14CX5 517 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 FAAH2Q6GMR7 532 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 SLITRK4Q8IW52 837 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 OR2T27Q8NH04 317 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 LCN9Q8WX39 176 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 SMIM10Q96HG1 83 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 C1QTNF7Q9BXJ2 289 aa13.71□□□□□ -0.22
CCT3-201ENST00000295688 MRPS7Q9Y2R9 242 aaKnown RBP13.71□□□□□ -0.22
CCT3-201ENST00000295688 GOLGA4Q13439 2230 aaKnown RBP13.71□□□□□ -0.22
CCT3-201ENST00000295688 LOC105369274A0A096LPK9 316 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 TRABD2BA6NFA1 517 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 NAP1L6A6NFF2 107 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 MEN1O00255 615 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 BET1O15155 118 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SSNA1O43805 119 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 ECDO95905 644 aaPredicted RBP13.7□□□□□ -0.22
CCT3-201ENST00000295688 TYRP1P17643 537 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 ATF1P18846 271 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 RBM34P42696 430 aaKnown RBP13.7□□□□□ -0.22
CCT3-201ENST00000295688 DGCR2P98153 550 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 CAMK2DQ13557 499 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 FAM78AQ5JUQ0 283 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 UBE2NLQ5JXB2 153 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 FHL5Q5TD97 284 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 RPL22L1Q6P5R6 122 aaKnown RBP13.7□□□□□ -0.22
CCT3-201ENST00000295688 OR4N4Q8N0Y3 316 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SIX5Q8N196 739 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 POMGNT2Q8NAT1 580 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 OR5J2Q8NH18 312 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 LRRC20Q8TCA0 184 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SMIM4Q8WVI0 70 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SMARCD2Q92925 531 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SMIM19Q96E16 107 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SYNPO2LQ9H987 977 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 ADAP2Q9NPF8 381 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
CCT3-201ENST00000295688 CENPVL1A0A0U1RR11 272 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 A0A1W2PRG6 482 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 ZNF879B4DU55 563 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 PPP1R3DO95685 299 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 UCHL1P09936 223 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 SNRPBP14678 240 aaKnown RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 GDI2P50395 445 aaKnown RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 EPHA4P54764 986 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 LGALS3BPQ08380 585 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 BAMBIQ13145 260 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 FGL2Q14314 439 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 CDK5R1Q15078 307 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 EID2Q8N6I1 236 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 OR4E2Q8NGC2 313 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 OR11H4Q8NGC9 324 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 ZNF671Q8TAW3 534 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 GIMAP1Q8WWP7 306 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 DACT3Q96B18 629 aaPredicted RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 TM4SF19Q96DZ7 209 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 ASB16Q96NS5 453 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 GSDMCQ9BYG8 508 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 SPRTNQ9H040 489 aaPredicted RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 UBQLN2Q9UHD9 624 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 SERTAD3Q9UJW9 196 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 NPTNQ9Y639 398 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 SLC22A7Q9Y694 548 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 TUBAL3A6NHL2 446 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 PDCD5O14737 125 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 GPRIN2O60269 458 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 IL9P15248 144 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 CXCL3P19876 107 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 AP3S2P59780 193 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 RAB14P61106 215 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 POU6F2P78424 691 aaPredicted RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 SIM1P81133 766 aaPredicted RBP13.69□□□□□ -0.22
CCT3-201ENST00000295688 SNTA1Q13424 505 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 RUNX2Q13950 521 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 ST3GAL2Q16842 350 aa13.69□□□□□ -0.22
CCT3-201ENST00000295688 TRMT12Q53H54 448 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms