RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ZNF761Q86XN6 746 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 PCSK9Q8NBP7 692 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 TFGQ92734 400 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 GLYATL1Q969I3 302 aa14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 FOXN4Q96NZ1 517 aa14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 GLIPR2Q9H4G4 154 aa14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 KCMF1Q9P0J7 381 aa14.8□□□□□ -0.04
PRPF40B-201ENST00000261897 CDC42EP2O14613 210 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 SSX5O60225 188 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 RECKO95980 971 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 FAUP35544 74 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 CDK5Q00535 292 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 KRBOX4Q5JUW0 171 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 GLT8D1Q68CQ7 371 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 RD3Q7Z3Z2 195 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 LRRTM1Q86UE6 522 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 CCDC36Q8IYA8 594 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 PLA2G15Q8NCC3 412 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 BRIX1Q8TDN6 353 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 PTP4A1Q93096 173 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 ELP4Q96EB1 424 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 HSPA12BQ96MM6 686 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 LDAHQ9H6V9 325 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 FGF20Q9NP95 211 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 ZNF879B4DU55 563 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 DPM1O60762 260 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 SC5DO75845 299 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 AK4P27144 223 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 LIMS1P48059 325 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 PRMT2P55345 433 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 FLI1Q01543 452 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 NNATQ16517 81 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 MRPL10Q7Z7H8 261 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 ENKD1Q9H0I2 346 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 HRH4Q9H3N8 390 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 KIF25Q9UIL4 384 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 YIPF1Q9Y548 306 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 RP1P56715 2156 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 UNC119BA6NIH7 251 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 NDUFS4O43181 175 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 UGDHO60701 494 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 SOCS5O75159 536 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 ATP1B1P05026 303 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 PXNP49023 591 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 PRR5P85299 388 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 FAM110CQ1W6H9 321 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 TSSK4Q6SA08 328 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 MEPCEQ7L2J0 689 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 TAF8Q7Z7C8 310 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 NUP43Q8NFH3 380 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 OR10R2Q8NGX6 335 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 ATOH1Q92858 354 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 CAMK1GQ96NX5 476 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 DNTTIP1Q9H147 329 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 MRPS30Q9NP92 439 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 ASB6Q9NWX5 421 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 CBLCQ9ULV8 474 aa14.79□□□□□ -0.04
PRPF40B-201ENST00000261897 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 LRRC37A2A6NM11 1700 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 OR2W5A6NFC9 320 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 AIPO00170 330 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 ITPKBP27987 946 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 HTR1FP30939 366 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 CAP1Q01518 475 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 GUCA2AQ02747 115 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 EOGTQ5NDL2 527 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 C1orf94Q6P1W5 598 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 OR51S1Q8NGJ8 323 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 SUN3Q8TAQ9 357 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 FZD3Q9NPG1 666 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 ZNF780BQ9Y6R6 833 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 GREB1Q4ZG55 1949 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 TRBV5-4A0A0C4DH59 114 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 MFSD2BA6NFX1 497 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 SURF4O15260 269 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 C1orf105O95561 183 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 EEF1A2Q05639 463 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 FNDC3BQ53EP0 1204 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 KIAA1211LQ6NV74 962 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 H3F3CQ6NXT2 135 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 RTN4RL1Q86UN2 441 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 TSEN15Q8WW01 171 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 RGMAQ96B86 450 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 TM4SF18Q96CE8 201 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 CXorf40BQ96DE9 158 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 PARP12Q9H0J9 701 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 BIN3Q9NQY0 253 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 GXYLT2A0PJZ3 443 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 M0QYG6 137 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 UGT2B7P16662 529 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 ZNF3P17036 446 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 MAOBP27338 520 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 RFLNBQ8N5W9 214 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 ZNF676Q8N7Q3 588 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 OR51Q1Q8NH59 317 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 SCLYQ96I15 445 aa14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 TSPAN10Q9H1Z9 355 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-201ENST00000261897 ELOA3DA6NLF2 546 aaPredicted RBP14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 K7ESM1 405 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 APOC1P02654 83 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms